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Domain assignment for A0A077H8J0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A077H8J0
Domain Number 1 Region: 161-497
Classification Level Classification E-value
Superfamily gp120 core 7.55e-172
Family gp120 core 0.000000000333
Further Details:      
 
Domain Number 2 Region: 546-671
Classification Level Classification E-value
Superfamily Virus ectodomain 3.24e-58
Family Virus ectodomain 0.0000113
Further Details:      
 
Domain Number 3 Region: 86-160
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000147
Family gp120 core 0.00019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A077H8J0
Sequence length 862
Comment (tr|A0A077H8J0|A0A077H8J0_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVTEIRKNYQQWWRGVTLLLGILMISCDAEQSWVTVYYGVPVWKEATTTLFCASDAKAY
KKEVHNVWATHACVPTDPNPQELVLANVTEDFNMWKNGMVEQMHEDIISLWDQSLKPCVK
LTPLCVSLNCSNPNWDANTTTNATNPSNNNTSSIPILDEREIKNCSFNTTTSIRDKMQEN
YALFYTMDIVPIDDKNDTKYRLISCNTSVIRQACPKVSFEPIPIHYCAPAGFAILKCNNK
TFSGKGPCTNVSTVQCTHGIRPVVSTHLLLNGSLAEKEVVIRSDNFSDNAKTIIVHLNKT
VNITCIRPGNNTRRSIHMGPGAAIYATGQIIGDIRQAHCNISRAEWNNTLIKVVKKLREQ
FKNKTIVFSPSSGGDPEIVMHTFNCGGEFFYCNSTPLFNSTWLSNDTWNETEGNGGNITL
LCRIKQIINVWQEVGKAMYAPPIRGQIKCTSKITGLLLTRDGGNNGSEPTETFRPGGGNM
KDNWRSELYKYKVVKVEPLGLAPTKAKRRVVQREKRAIGGLGALFLGLLGAAGSTMGAAS
LTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLG
IWGCSGKLICSTNVPWNNSWSNKSLTEIWDNMTWMQWEKEIDNYTDEIYKLLAESQFQQE
KNEQDLLKLDKWASLWNWFDITSWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSP
LSFQTRLPAPRGPDRPDGTEEEGGERDRDRSTRLVDGFLALIWDDLRSLFLFSYHRLRDL
LLIVTRIVELLGRRGWEILKYWWNLLQYWSQELKNSAVSLFNATAITVAEGTDRVIEVVQ
RIFRGVLHVPRRIRQGFERVLL
Download sequence
Identical sequences A0A077H8J0

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