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Domain assignment for A0A077L9H0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A077L9H0
Domain Number 1 Region: 277-406
Classification Level Classification E-value
Superfamily Retrovirus capsid protein, N-terminal core domain 7.69e-54
Family Retrovirus capsid protein, N-terminal core domain 0.00000156
Further Details:      
 
Domain Number 2 Region: 78-180
Classification Level Classification E-value
Superfamily Retroviral matrix proteins 3.59e-41
Family MMLV matrix protein-like 0.0000147
Further Details:      
 
Domain Number 3 Region: 535-575
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000000000715
Family Retrovirus zinc finger-like domains 0.00069
Further Details:      
 
Domain Number 4 Region: 595-631
Classification Level Classification E-value
Superfamily Acid proteases 0.000000000528
Family Retroviral protease (retropepsin) 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A077L9H0
Sequence length 633
Comment (tr|A0A077L9H0|A0A077L9H0_FLV) Gag-pol polyprotein gPr80 {ECO:0000313|EMBL:BAP40567.1} OX=11768 OS=Feline leukemia virus. GN= OC=Gammaretrovirus. OH=9681
Sequence
MSGASSGTATGARLFGISSVLGEYRVLIGDEGAGPSRSPSEVSFSVWYRSRAARLVILCL
VASFLVPCLTFLIAEAVMGQTVTTPLSLTLDHWSEVRTRAHNQGVEVRKKKWVTLCEAEW
VMMNVGWPREGTFSLDNISQVEKKIFAPGPYGHPDQVPYITTWRSLATDPPSWVRPFLPP
PKPPAPLPQPLSPQPSAPPTSSLYPVLPKSDPPKPPVLPPDPSSPLIDLLTEEPPPYPGG
HGPTPPSGPRTPAASPIASRLRERRENPAEESQALPLREGPNNRPQYWPFSASDLYNWKS
HNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQALLTAEERQRVLLEARKQVPGEDGR
PTQLPNVIDEAFPLTRPNWDFATPAGREHLRLYRQLLLAGLRGAARRPTNLAQVKQVVQG
KEETPAAFLERLKEAYRMYTPYDPEDPGQAASVILSFIYQSSPDIRNKLQRLEGLQGFTL
SDLLKEAEKIYNKRETPEEREERLWQRQEERDKKRHKEMTKVLATVVAQNRDKDREESKL
GDQRKVPLGKDQCAYCKERGHWVRDCPKRPRKKPANSTLLNLEDXESQGQDPPPEPRITL
KIGGQPVTFLVDTGAQHSVLTRPDGPLSDRTAL
Download sequence
Identical sequences A0A077L9H0

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