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Domain assignment for A0A077LFE4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A077LFE4
Domain Number 1 Region: 277-406
Classification Level Classification E-value
Superfamily Retrovirus capsid protein, N-terminal core domain 7.69e-54
Family Retrovirus capsid protein, N-terminal core domain 0.00000156
Further Details:      
 
Domain Number 2 Region: 78-180
Classification Level Classification E-value
Superfamily Retroviral matrix proteins 2e-41
Family MMLV matrix protein-like 0.0000145
Further Details:      
 
Domain Number 3 Region: 535-575
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000000000767
Family Retrovirus zinc finger-like domains 0.00069
Further Details:      
 
Domain Number 4 Region: 595-631
Classification Level Classification E-value
Superfamily Acid proteases 0.00000000144
Family Retroviral protease (retropepsin) 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A077LFE4
Sequence length 633
Comment (tr|A0A077LFE4|A0A077LFE4_FLV) Gag-pol polyprotein gPr80 {ECO:0000313|EMBL:BAP40594.1} OX=11768 OS=Feline leukemia virus. GN= OC=Gammaretrovirus. OH=9681
Sequence
MSGASSGTAIGARLFGISSVLGEYRVLIGDEGAGPSRSPSEVSFSVWYRSRAARLVILCL
VASFLVPCLTFLIAEAVMGQTVTTPLSLTLDHWSEVRTRAHNQGVEVRKKKWVTLCEAEW
VMMNVGWPREGTFSLDNISQVEKKVFAPGPYGHPDQVPYITTWRSLATDPPSWVRPFLPP
PKPPTPLPQPLSPQPSAPPTSSLYPVLPKSDPPKPPVLPPDPSSPLIDLLTEEPPPYPGG
HGPTPPSGPRTPAASPIASRLRERRENPAEESQALPLREGPNNRPQYWPFSASDLYNWKS
HNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQALLTAEERQRVLLEARKQVPGEDGR
PTQLPNVIDEAFPLTRPNWDFATPAGREHLRLYRQLLLAGLRGAARRPTNLAQVKQVVQG
KEETPAAFLERLKEAYRMYTPYDPEDPGQAASVILSFIYQSSPDIRNKLQRLEGLQGFTL
SDLLKEAEKIYNKRETPEEREERLWQRQEERDKKRHKEMTKVLATVVAQNRDKDREESKL
GDQRKIPLGKDQCAYCKERGHWVRDCPKRPRKKPANSTLLNLEDXESQGQDPPPEPRITL
RIGGQPVTFLVDTGAQHSVLTRPDGPLSDRTAL
Download sequence
Identical sequences A0A077LFE4

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