SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A078HCB4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A078HCB4
Domain Number 1 Region: 361-504
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 6.54e-30
Family Gelsolin-like 0.00031
Further Details:      
 
Domain Number 2 Region: 572-694
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 1.63e-23
Family Gelsolin-like 0.00072
Further Details:      
 
Domain Number 3 Region: 198-320
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 1.36e-22
Family Gelsolin-like 0.00098
Further Details:      
 
Domain Number 4 Region: 9-123
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 6.08e-22
Family Gelsolin-like 0.00013
Further Details:      
 
Domain Number 5 Region: 104-212
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 5.1e-21
Family Gelsolin-like 0.0008
Further Details:      
 
Domain Number 6 Region: 882-946
Classification Level Classification E-value
Superfamily VHP, Villin headpiece domain 1.83e-20
Family VHP, Villin headpiece domain 0.00065
Further Details:      
 
Domain Number 7 Region: 487-586
Classification Level Classification E-value
Superfamily Actin depolymerizing proteins 8.63e-18
Family Gelsolin-like 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A078HCB4
Sequence length 946
Comment (tr|A0A078HCB4|A0A078HCB4_BRANA) BnaA03g19590D protein {ECO:0000313|EMBL:CDY35401.1} KW=Complete proteome; Reference proteome OX=3708 OS=Brassica napus (Rape). GN=GSBRNA2T00058386001 OC=Brassica.
Sequence
MSGSAKVLDPAFQGAGQKPGTEIWRIENFEAVPVPKTEHGKFYMGDTYIVLQQTTQNKGG
AYLFDIHFWIGKDTSQDESGTAAVKTVELDAVLGGRAGGVASGFKTPEEEVFETRLYTCK
GKRAIRLKQVPFARSSLNHDDVFILDTKEKIYQFNGANSNIQERAKALEVVQYLKDKYHE
GTCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGRKVANDDDVIPESTPPKLYCITDGQME
PIDGDLSKSMLENTKCYLLDCGAEVFVWVGRVTQVDERKAANQSAEEFLASENRPKATRV
TRVIQGYESHSFKSNFDSWPSGSAAPGNEEGRGKVAAMLKQQNVGLKGSSKSATPVNEDV
PPLLEAGGKLEVWVVDGKAKSPLPKEDIGKFYSGDCYLVLYTYHAGDRKEDYFLCCWFGK
SSTQEDQDTALRLANTMSNSLKGRPVQGRIYEGKEPPQFVALFQPMVILKGGLSSGYKSN
VEEKGSPDETYTPDSISLIQVSGTGVHNNKALQVEPVATSLNTYECFLLQSGTSMFLWHG
NQSAHELLELAAKVAEFLKPGVTLKHAKEGTESSTFWFALGGKQNFTSKKASPETVRDPH
LFSFSINRGKFQVEEIYNFAQDDLLTEDIYLLDTHAEVFVWVGQCVDPKEKQTVFEIGQK
YIDRAGSLEGLSPKVPLYKINEGNEPCFFTTYFSWDHSKAIVQGNSFQKKAALLFGTHHV
VEDKSSGGGPRQRAEALAALNSAFNSSTSRPAYSSQDRSSESQEGPRQRAEALAALTSAF
SSSSSTKAPPPPPRSVGTSQASQRAAAVAALSQVLVAENKKTPDTSPTRRSTSSNPADDS
LLTEAKDDQVEASEEEEVPPAVEEPEVKQEETEEQDESVIEPSDATFTYEQLKANSENAV
TGIDYKRREAYLSEEEFQSVFGMEKDAFNNLPRWKQDLLKKKFDLF
Download sequence
Identical sequences A0A078HCB4

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]