SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A087DDE4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A087DDE4
Domain Number 1 Region: 117-254
Classification Level Classification E-value
Superfamily Sortase 8.37e-43
Family Sortase 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A087DDE4
Sequence length 358
Comment (tr|A0A087DDE4|A0A087DDE4_9BIFI) Fimbrial protein {ECO:0000313|EMBL:KFI93544.1} KW=Complete proteome; Reference proteome OX=158787 OS=Bifidobacterium scardovii. GN=BSCA_0032 OC=Bifidobacterium.
Sequence
MAVIAHHVTERYDVLRAWTFSKVAALIGVVAIVGVVIFLYPDISNWTNQYYQVQILRNLQ
EQERHATPPAIEQIDNALRYNQALQSGAIVGANERLPIADGHANGMTDGGLLPYDQQLNI
DGTGIMGRIRIPKIDVDLPIYHGTSEETLLKGVGHLEGTSLPVGGESTHSVLTGHRGLAS
AKIFTDLDRIVSGDSFVVEILGQAFTYRVFDVRVVEPSETQYLKTQPGKDLMTLVTCTPI
GINSHRILVTGERVVPTPQRDKDDVGKNIAVPFPMWAVWLGLALVLVGLYQWRMGFVTVP
AGRDGESRDGGPREGGVRDEGSREGGSQGAGPRKAGPRKAGPRKAGPRKAGKGRGRHA
Download sequence
Identical sequences A0A087DDE4
WP_070098285.1.11303 WP_070098285.1.33656 WP_070098285.1.62576 WP_070098285.1.98341

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]