SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A087GRN6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A087GRN6
Domain Number 1 Region: 208-356
Classification Level Classification E-value
Superfamily PAP/OAS1 substrate-binding domain 7.59e-64
Family Poly(A) polymerase, PAP, middle domain 0.00000259
Further Details:      
 
Domain Number 2 Region: 11-206
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 3.18e-52
Family Poly(A) polymerase, PAP, N-terminal domain 0.00000872
Further Details:      
 
Domain Number 3 Region: 359-485
Classification Level Classification E-value
Superfamily PAP/Archaeal CCA-adding enzyme, C-terminal domain 6.47e-37
Family Poly(A) polymerase, PAP, C-terminal domain 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A087GRN6
Sequence length 776
Comment (tr|A0A087GRN6|A0A087GRN6_ARAAL) Uncharacterized protein {ECO:0000313|EMBL:KFK32538.1} KW=Complete proteome; Reference proteome OX=50452 OS=Arabis alpina (Alpine rock-cress). GN=AALP_AA6G256000 OC=Arabis.
Sequence
MVATQRSPPVSYGITKPLSVAGPSAADVKRNLELEKFLVDEGLYEIKEDTMRREEVLRRI
DQIVKHWVKQLTHQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREE
DFFIILRDMLAEMEEVTELQPVADAHVPVMKFKFQGISIDLLYAKISLLVVPQDLDISNS
SLLCDVDEQTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGV
NWALLVARLCQLYPNAIPSMLVSRFFRVFTQWHWPNPVMLCAIEEDELGFPVWDPRKNHR
DRYHHMPIITPAYPCMNSSYNVSQSTLRVLTEQFQFGNKICQEIELNKQHWSSLFEQYMF
FEAYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSK
QFPHCAFFMGLQRAEGVGDQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQL
PPFVFPNGCRRPRQSRHQNQQHREPGEEGVGSMSAYAERHAKRNNDNELMDTRPEKREKC
ASLSPHSVDVVSPDGSAITNGGIPQNGIVSGPRAECLVTGDLACNVGSLPNVEVEAGKII
SKSTELIKFSQFEHDTGSKKILEVDSRTLVQGCHDLAELVGKHVRSHLSAVVACDGRQNE
ETGRDMGSESINDTDTQHLPRGRHLREDVDEFARESRLGEIADGVLRNGYCGRNLNNEGL
FTAANLDLAVGHRNLHSEGLCKSSLSEELQSNHLLSGMGRPEDVASSSRLSLKSVV
Download sequence
Identical sequences A0A087GRN6

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]