SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A087R9T5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A087R9T5
Domain Number 1 Region: 503-762
Classification Level Classification E-value
Superfamily NHL repeat 1.94e-47
Family NHL repeat 0.00000736
Further Details:      
 
Domain Number 2 Region: 353-449
Classification Level Classification E-value
Superfamily E set domains 1e-22
Family Filamin repeat (rod domain) 0.0032
Further Details:      
 
Domain Number 3 Region: 120-182
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.00000000000000183
Family B-box zinc-binding domain 0.002
Further Details:      
 
Domain Number 4 Region: 29-103
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000000000457
Family RING finger domain, C3HC4 0.0074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A087R9T5
Sequence length 764
Comment (tr|A0A087R9T5|A0A087R9T5_APTFO) Tripartite motif-containing protein 2 {ECO:0000313|EMBL:KFM10239.1} KW=Complete proteome; Reference proteome OX=9233 OS=Aptenodytes forsteri (Emperor penguin). GN=AS27_12827 OC=Aptenodytes.
Sequence
KGTGPICQWSRMASEGSNIPSPVVRQIDKQFLICSICLDRYKNPKVLPCLHTFCERCLQN
YIPAHSLTLSCPVCRQTSILPEKGVSALQNNFFITNLMDVLQRTPDNSIEESSILETVTA
VAAGKPLSCPNHDGNVMEFYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQL
DAVNKRHGDSTDYFLLPEIDSALHFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKS
VLLMELEVNYGLKHKVLQTQLDTLLEGQESIKSCSNFTAQALNHGTETEVLLVKKQMSDK
LNELAERDFPLQPRENDQLDFIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTVI
GQPMSVTITTKDKDGELCKSGNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGD
FTLSLRLYDQHIKGSPFKLKVVRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYST
GKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFK
SRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKAKIGSGKLMGPKG
VSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDKQFAGPHFAAVNSNNEIIVTD
FHNHSVKVFNQEGEFILKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSG
SFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ
Download sequence
Identical sequences A0A087R9T5 A0A093PG93

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]