SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A087YBF6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A087YBF6
Domain Number 1 Region: 324-462
Classification Level Classification E-value
Superfamily PAP/OAS1 substrate-binding domain 4.71e-38
Family RNA editing terminal uridyl transferase 2, RET2, domain 2 0.062
Further Details:      
 
Domain Number 2 Region: 173-336
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 4.91e-37
Family Poly(A) polymerase, PAP, N-terminal domain 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A087YBF6
Sequence length 678
Comment (tr|A0A087YBF6|A0A087YBF6_POEFO) PAP associated domain containing 5 {ECO:0000313|Ensembl:ENSPFOP00000015359} KW=Complete proteome; Reference proteome OX=48698 OS=Poecilia formosa (Amazon molly) (Limia formosa). GN= OC=Poeciliinae; Poecilia.
Sequence
MDPRIAWFQPEQRGPANNLWMQIWETTQGLGYLHVNSSYSTGSQSTPSLKPIVNNGASGA
VLTCRNGTLDSHNGGGDVKTQGMSTSAGVGEMTEQRDFIPLDTNSNHNNRAAGRGGVGGG
GQQGSGVAVLWRGLTDGHPNKRKRDNKASTFGFNSSLLNNGCGSNTERYEGYTGTPWKVR
NYSEGVVGLHEEIKDFYEYISPRPEEEKMRLEVVDRIKGVIKNLWPSAEVQVFGSFSTGL
YLPTSDIDLVVFGKWDTLPLWTLEDELRKNNVADENSIKVLDKATVPIIKLTDSFTEVKV
DISFNVNGGVKAARLIKEFKEKYPVLPYLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAV
SFLQLHNRDVSSPNINIGVLLIEFFELYGRNFNYLKTGIRITDGGCYVAKDEVQKNMMDG
YRPSMLYIEDPLQPDNDVGRSSYGAMQVKQAFDYAYVVLGHAVSPIAKYYPNNENESILG
RIIRVTQEVDEYREWIRKNWDSQSQNDRSLNRNDVKLLESKQLDECNNNFPDDEDVVVLP
SAPHSKSSSNTSSPLPSLGSSPSSSPLSPSSTSSSDGDSDGTPCKTVKQQPVRNASTHRE
KSTVVSNHRIQNHSTSTPPASNKGGKARMSRSNNKSGHHGQQNSSFSSKSHQSNKPHQQG
NSKKRKNIRDSTQEDLCR
Download sequence
Identical sequences A0A087YBF6
ENSPFOP00000015359 XP_007552208.1.10163

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]