SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A088F7X8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A088F7X8
Domain Number 1 Region: 249-311,478-516
Classification Level Classification E-value
Superfamily Hedgehog/intein (Hint) domain 0.000000000000392
Family Intein (protein splicing domain) 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A088F7X8
Sequence length 619
Comment (tr|A0A088F7X8|A0A088F7X8_9CAUD) Structural protein {ECO:0000313|EMBL:AIM41103.1} KW=Complete proteome; Reference proteome OX=1540823 OS=Salmonella phage LSPA1. GN=LSPA1_05 OC=Guernseyvirinae; Jerseyvirus.
Sequence
MSLLTSLISHQIWLQRTASGEVKDLTPFIKEMRDEIKRQVLLFGDDGRSTARLNKLLRDL
EEALAGLTGDWQTKLTEDLKGLAAYEAEWNVKTLTTNANAEFVTPTAEQVWAAAEFQPLS
LSDKPVDFTKLMAGWGETEVARLVTGVKMGFVQGQTTRQIVKNVVGAGGLADISERNAAT
VIRTALSHVSNEARNETYRQNDDIIEKYEWVSTLDSRTSTICRARDGMTWEIGKGPMPPA
HPNCLLGDTVVSTGSPVSNIFKRAYKGVIVYVSTKSGRTLSITPNHQVLTTSGWVASGLL
NVGDKLVCAKDSALSLKHKEHNVVAKFSDLFSAANVAVNPAAVSTSPTSPEDFHGDGTDG
EVEIVLVDRLSWDKVKSGLNKQIIDKELPVTAGVDDSLPGFGSAKQLGMVGLSPSDSFMR
RGGESEAILGGSFSHSDKHSVATSANGNAVLSENAYDWATRNADNLSDFNWSDAVGVELD
DVVDLVFSEADFCGHVYNLENEQNWYLANGVIAHNCRSTTAPVISPEFDFLDKGAKRAAR
GADGGQQVSANTTYYEFLKQQPAWFQDEALGPVRGKIFRNSGVTPEEFRVISVDGFGRPL
SLKEMAELDKRVANYLKEE
Download sequence
Identical sequences A0A088F7X8
YP_009113152.1.97653

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]