SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A088FQI1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A088FQI1
Domain Number 1 Region: 190-453
Classification Level Classification E-value
Superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein 3.92e-83
Family Head and neck region of the ectodomain of NDV fusion glycoprotein 0.00000000136
Further Details:      
 
Domain Number 2 Region: 68-223
Classification Level Classification E-value
Superfamily Virus ectodomain 3.56e-52
Family Virus ectodomain 0.000000144
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A088FQI1
Sequence length 553
Comment (tr|A0A088FQI1|A0A088FQI1_9MONO) Fusion glycoprotein F0 {ECO:0000256|RuleBase:RU003705, ECO:0000256|SAAS:SAAS00628579} OX=11176 OS=Avian avulavirus 1. GN=F OC=Mononegavirales; Paramyxoviridae; Avulavirus.
Sequence
MGSKPSTRIPAPLMLITRIMLILSCIRLTSSLDGRPLAAAGIVVTRDKAVNVYTSSQTGS
IIVKLLPNMPRDKEACAKAPLEAYNRTLTTLLTPLGDSIRKIQGSVSMSGGRRQKRFIGA
VIGSVALGVATAAQITAAAALIQAKQNAANILRLKESIAATNEAVHEVTDGLSQLSVAVG
KMQQFVNDQFNNTARELDCIKITQQVGVELNLYLTELTTVFGPQITSPALTQLTIQALYN
LAGGNMDYLLTKLGIGNNQLSSLIGSGLITGYPILYDSHTQLLGIQVNLPSVGNLNNMRA
TYLETLSVSTTKGYASALVPKVVTQVGSVIEELDTSYCIESDLDLYCTRIVTFPMSPGIY
SCLSGNTSACMYSKTEGALTTPYMALKGSVIANCKITTCRCTDPPGIISQNYGEAVSLID
RHSCNVLSLDGITLRLNGEFDATYQKNISILDSQVIVTGNLDISTELGNVNNSISNALDR
LAESNSKLEKVDVRLTSTSALITYIVLTVISLIFGALSLVLACYLMYKQKAQQKTLLWLG
NNTLDQMRATTRA
Download sequence
Identical sequences A0A088FQI1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]