SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A090P7N5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A090P7N5
Domain Number 1 Region: 5-145
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.06e-48
Family Ribonuclease PH domain 1-like 0.0000169
Further Details:      
 
Domain Number 2 Region: 299-493
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.68e-46
Family Ribonuclease PH domain 1-like 0.0000203
Further Details:      
 
Domain Number 3 Region: 146-236
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 2.52e-28
Family Ribonuclease PH domain 2-like 0.00097
Further Details:      
 
Domain Number 4 Region: 451-550
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 2.8e-27
Family Ribonuclease PH domain 2-like 0.00012
Further Details:      
 
Domain Number 5 Region: 608-695
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 6.77e-22
Family Cold shock DNA-binding domain-like 0.0000734
Further Details:      
 
Domain Number 6 Region: 240-321
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 4.97e-19
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.004
Further Details:      
 
Domain Number 7 Region: 553-630
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.00000000000000133
Family Eukaryotic type KH-domain (KH-domain type I) 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A090P7N5
Sequence length 709
Comment (tr|A0A090P7N5|A0A090P7N5_9VIBR) Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595} KW=Complete proteome; Reference proteome OX=265668 OS=Vibrio ponticus. GN=JCM19238_2742 OC=Vibrionaceae; Vibrio.
Sequence
MFEKPVVKTFQYGNHTVTLETGVIARQATAAVMVTMDDTAVFVSVVGKKEAVAGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPEGFTNEVQVIATVVS
VNPDVQPDIPTMIGTSAALAISGIPFNGPIGAARVGHIDGQLVLNPSNTELNASRLDLVV
AGTESAVLMVESEADNLTEEEMLSAVVFGHDQQQAVIKAINEFAAEVATPAWNWVAPEAN
TALNEKVADLAEAKLVEAYQITEKMARYDRIHEIAGEVNAAILAEDPEADAKEIHTIFHD
LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQ
RDAQIIDELTGEKKDYFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIAAVMPSID
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKSSVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTHTGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDQ
AISGARDDISEFAPRIHTMKISAEKIKDVIGKGGAVIRALTEETGTTIEIEDDGTIKIAA
TEGAAAKEAIRRIEEITAEVEVGRIYTGKVARLADFGAFVTILPGKDGLVHISQISEKRV
EKVSDYLTEGQEVQVKVLEIDRQGRVRLSMKEAVEKPAEEAEKPAADAE
Download sequence
Identical sequences A0A090P7N5

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]