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Domain assignment for A0A091JQM4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A091JQM4
Domain Number 1 Region: 46-253
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 7.32e-57
Family Nicotinic receptor ligand binding domain-like 0.0047
Further Details:      
 
Domain Number 2 Region: 254-449
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 9.29e-57
Family Neurotransmitter-gated ion-channel transmembrane pore 0.0041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A091JQM4
Sequence length 452
Comment (tr|A0A091JQM4|A0A091JQM4_COLST) Glycine receptor subunit alpha-2 {ECO:0000313|EMBL:KFP27472.1} KW=Complete proteome; Reference proteome OX=57412 OS=Colius striatus (Speckled mousebird). GN=N325_00725 OC=Coelurosauria; Aves; Neognathae; Coliiformes; Coliidae; Colius.
Sequence
MNRQLVKILTTLFAFFLETNHFRTTFCKEHDSRSGKSPSQTLSPSDFLDKLMGRTSGYDA
RIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSRLAYSEYPDDSLDLD
PSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKTGKVLYSIRLTLTLSCPMDLKNFP
MDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQFILKEDKELGYCTKHYNTGK
FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQ
SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFLRLRRRQRRQNK
EDEVARDSRFNFSGYGMGHCLQVKDGTAVKATPPNPPPAPPKDSESIKKKFVDRAKRIDT
ISRAAFPLAFLIFNIFYWITYKIIRHEDIHKK
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Identical sequences A0A091JQM4
XP_005516703.1.90289 XP_010207676.1.23224 XP_015500722.1.82291

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