SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A093J9M7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A093J9M7
Domain Number 1 Region: 127-265
Classification Level Classification E-value
Superfamily PAP/OAS1 substrate-binding domain 1.83e-37
Family RNA editing terminal uridyl transferase 2, RET2, domain 2 0.028
Further Details:      
 
Domain Number 2 Region: 2-122
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 5.18e-33
Family Poly(A) polymerase, PAP, N-terminal domain 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A093J9M7
Sequence length 527
Comment (tr|A0A093J9M7|A0A093J9M7_STRCA) DNA polymerase sigma {ECO:0000313|EMBL:KFV75629.1} KW=Complete proteome; Reference proteome OX=441894 OS=Struthio camelus australis. GN=N308_00141 OC=Struthio.
Sequence
MSPRPEEAAMRREVVKRIEMVIKDLWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPP
LQLLEQALRKHSVAEPYSIKVLDKATVPIIKLTDQETEVKVDISFNVETGVKAARFIKEY
MKKYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDARRADENLG
MLLIEFFELYGRNFNYLKTGIRIKNGGAYIAKEEIMKVMTNGYRPSMLCIEDPLLPGNDV
GRSSYGAMQVKQVFDYAYIVLSHAVSPLARSYPNRDSESTLGRIIKVTQEVIDYRAWIKK
QWGNKINLSPELDNRLKIRDQIAPCNGEQQQNRDSEPPYNQRLALSLASTQQLSSGSSAS
SVSSLSGSDIDSDTPPCTASNVYQFSLQAPTQLMASLPPALPMPSGKPQSAPTRTLIMAA
SNQYHCCSLFFSLFLASGNKALTACLYCFTGASLAKIVCFRACSYSDERGMKFSMKGAHN
HNQGNGYSPVGSGGMRQPVGNRGHHQYNRNIWRRKKHRDSLPISLSR
Download sequence
Identical sequences A0A093J9M7

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]