SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A096A0T4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A096A0T4
Domain Number 1 Region: 1336-1366,1443-1651
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 0.000000000000209
Family Integrin alpha N-terminal domain 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A096A0T4
Sequence length 2160
Comment (tr|A0A096A0T4|A0A096A0T4_9BACT) Type IV secretion protein Rhs {ECO:0000313|EMBL:KGF40573.1} KW=Complete proteome OX=1401077 OS=Prevotella denticola DNF00960. GN=HMPREF2139_07415 OC=Prevotella.
Sequence
MKYSTHSLLLPFLLLAGIMLNSCNGGSNRSAKETVISDSTSSDTVSSIQKDSTSPKATSL
RTQVKDSIQNSSVKRFSKEVVRNQKGNRVDTHKANRKSARLFADLGKRTVSKFFTNSDSD
TLNVGRAQLAVPREAMAKGKVLSITPLRKGELPTLPTGMVNVTGGCDTLMARTDTVSGYR
FLPHGNHFVHHLASIAVPYDSTLIPKGYTVDDIHTYYYDELHQRWTMLRSKGIDTKREVA
MAETSHFTDVINGIIKVPESPETQNYVPTGISELKAADPAAGIQQIEAPSANQNGTATLS
YPFEVPAGRNDIGVSAGLQYSSEGGSSFAGYGWSLPVQSIDIETRWGVPRFDDQYESESY
LLMGQQLNDRLYRRTDSLARQADKQFYPMTEGGFSRIIRKGDSPKNYYWEVTGKDGTVYS
YGGHGGHASDATSLADTNGNRIKWALDRVTDVHGNFAAFHYMKSGNNLYPERYTWTGFGE
TEGLYSIEFNWNTGNVHRVDYVRSGRLGVLQTDSLLLGSVEVKNNGQQLRSYTIHYEKGP
FGKTLLTSIDQNDSKGIVVAAQSFNYYNDVKKGLYADSITTYTAGIDNYGKLVKTKIGHF
DEHLSLLGGASSRGNTIGGGIMVGAGWGPATASAGASYSHTNSSNEGRVTLVDINGDGMP
DKVWKGSDGKLHYRLNMNKALSHPVFGKEQALVGVNSFSSGKATSYTLSANVATGFGPAN
MGYAISKTKDQNKTKVYFQDFNSDGLVDIAVNGIVYFNHSDGKDVTFAPASTATGNPIPS
IAGVNVAPAFKVDYKTVRDSLEREFPLHDVVRVWRAPYSGTVSVMSHVEKRSSEGDGVSL
SMQFNSDVLWKDTLLQSGSVTLPAITRSVKPGDVFVFRVGARYSGIGDDVIWDPEITYTS
IKTDKYAGEDLKRYRSSEDYISGAYSTAALSETAVNRFEGTFNKQKTSDDIILAIIKTDK
DGNQLVMDSLLLKADTVISHGSFSGNLTATAGEEATVNFIIRTASPINWKHIDWRPVFYA
DTMKYVLSPQCLMFSKNISLCPDTVIGRNVSIQSPVWGKALTLLPELSVQRMSNKDTAPA
TVYMTIKDDHGSLLYRKELTLGSSNQLTGSTIRIADGSVLAQNMSAGKIQVTYSILNELE
NATAKLKIFRDSVVSPATAGSPAVLRPVRVSTVNASVYSSFNRFDYGQLYKGWGSFAWNG
TAKNVAIPKDKMKIPETNEYYHDGKVNESAVEANEMDINRQLFFTLSYLPEKKYFVSATD
SAYVGSVVMRPSRLGEDDIIVDTVDYNIQGGGLAAPVLLTESKSKGKTYNMGFSLGASLG
VNKSNTSQQSYNIISAMDLNGDGYPDWLNDNDGKVVAQLTQPTGILGKGSLQYDVENAAT
DGDASNIGGDIGFSSDKNAYSFKDFKEKMAVAKAAFAQHTTTKQIMKQRAAEGNSASHSG
KVAEFSCGASGNFSSGTSETVRGWEDLNGDGLPDMVTNGTVRYGLGYDFTPAIASSLTQL
ESTKNSNFGDGLGITVPVLGLFSVNIGQNDTESLTSTRSQLSDVNGDGLPDLLQLDEKGN
LKATLNTGSGFMSGSTSLGQSNISDNLGSSVAIYASTAYTYTIPLPFGFTISITPSVQGS
HSESISRTTAAVMDMDGDGLPDLVYSDSENHLYVRRNLTGRTNMLKSVTLPFGGHIHISY
EQTTPSYDLPGRRWVMSSVETTGGYKENGAVRSRNAFEYSGGYRDRRERDFYGFKQVRTN
QIDTENGDRLYRYSVQTYGKNRDYYAHGLVTSEYLYTADGKKLQGAVYDYDLKTLAVGNN
TTDAVVFPALKTLVQSNFDEASGDSLSVAVSNTYDDYGNLQRYKETTTAYSLEANINYHK
IADKYIVSVPSHIAVSSGGKTYRERSTKVDGNGEITEIVLHNGDKPSVYNMTYDGYGNIT
RMTKPENYNHQRMFYAYTYDDLYHSLVTSVKDAYGYSSSTAYDGLWNAPSVTTDLNGQKM
EYTYDALGRQQTIRAPYEIESGQPFTIRFEYFPAERKAHTIHYSKEGNIDTYTFADSLMR
AVQTKQTGVVWSGGSNQKVSIVSGRAVVDAFGRNIAAYYPMTESHGNIGTYNHATGDLQA
KTEYDAHDRTMSVTLADGSVTRTAYSIGSHDGEPMLQTTVTDALGRHAESYTDAKGRNRE
Download sequence
Identical sequences A0A096A0T4
WP_036855853.1.35381

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]