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Domain assignment for A0A096MF96 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A096MF96
Domain Number 1 Region: 45-250
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 1.7e-55
Family Nicotinic receptor ligand binding domain-like 0.0052
Further Details:      
 
Domain Number 2 Region: 251-373,414-518
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 3.53e-53
Family Neurotransmitter-gated ion-channel transmembrane pore 0.0028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A096MF96
Sequence length 518
Comment (tr|A0A096MF96|A0A096MF96_POEFO) Gamma-aminobutyric acid (GABA) A receptor, beta 1 {ECO:0000313|Ensembl:ENSPFOP00000030087} KW=Complete proteome; Reference proteome OX=48698 OS=Poecilia formosa (Amazon molly) (Limia formosa). GN= OC=Poeciliinae; Poecilia.
Sequence
MWKPLAASELPAMWITVCSVSLLITVVCGAQSANEPSNMSYVKATVDKLLKGYDIRLRPD
FGGAPVDVGMRIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQ
LWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNC
TLEIESYGYTTDDIEFYWQGGSNAGSVTGVENIELPQFSIIDYQTLSKKAVFATGSSYPR
LSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTH
LRETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKAAEKAAKSNNE
NKGRLESSKVQVGEDLSGKYQSLMSKKGMNALKKTLNYFFKYLWWVDAHGNILLTNLPTE
MGGPDMMGALNDPRATMFSYDSASIQYRKPMTSRDLYGRPALDRPIGHKKSRLRRRASQL
KVKIPDLTDVNAIDKWSRVVFPITFTFFNLVYWLYYVH
Download sequence
Identical sequences A0A096MF96
ENSPFOP00000004601

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