SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0A0LNR1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0A0LNR1
Domain Number 1 Region: 869-1187,1290-1333
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 2.59e-68
Family FAD-linked reductases, N-terminal domain 0.0000354
Further Details:      
 
Domain Number 2 Region: 1169-1280
Classification Level Classification E-value
Superfamily FAD-linked reductases, C-terminal domain 3.4e-28
Family L-aminoacid/polyamine oxidase 0.00037
Further Details:      
 
Domain Number 3 Region: 633-727
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000000000493
Family SWIRM domain 0.048
Further Details:      
 
Weak hits

Sequence:  A0A0A0LNR1
Domain Number - Region: 1428-1513
Classification Level Classification E-value
Superfamily Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.000112
Family Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0A0LNR1
Sequence length 1909
Comment (tr|A0A0A0LNR1|A0A0A0LNR1_CUCSA) Uncharacterized protein {ECO:0000313|EMBL:KGN62659.1} KW=Complete proteome; Reference proteome OX=3659 OS=Cucumis sativus (Cucumber). GN=Csa_2G365660 OC=Benincaseae; Cucumis.
Sequence
MDGDNKKSGFRKRTKPKDGGFDSDVDEPIGSLLKLKRSRNSKKTKLNVDDGGGRDKMVDK
KGAKLPVQEDFGGMDDTLASFRKKLKRPKKVSGTGIAREQSSALSVTESLNPLFNTSKGH
GDLDTRLRPENGELMDREDSDSSAKIDAEMRCEAPDLESKDMVMGISSRRSANCSLDKQL
DDSLSAFVQKVQSGSTRKSVVSTTFRPDCKDEASEDKLSPFCRAVSEDHEAHSIVSINSS
SKLAQVVKKPDSELTTSYLISCSHCTKENCNPGRGQCHQGIKHDQEEDPCSLNGHENPDM
RPCISNEVADKDSKNFSQFRDNFRVLERKASCEIKNVLKHCSCGNTITNSHLAEMGSFQD
GLGENQINENMCSSCRPLEKINENHDLCVGVSSRDFCDAVAQETTVNLSKTIPGVDCEGK
ERLLVKYHDELSKSTNFCESSSNPQLSAGFDSTKVDKTDSDSDNLNTGNDEPNDKGRSMQ
KENATISNRIDSTAVQSLTLQKLGPKYPDFCPGGNFSMISDSQPAKVPLEMDGPNNILTG
KEVKVSSLGSFTPDDNDLEDVISAPESEKDLKLSALQRVARKTKKPRHEDMAYEGDIDWE
VLISERAVDGDHSFRSRKDSTSTTFTEAETGGRAAVSAGLKAHAVGLLEKIKFKDVLKRK
GGLQEYIACRNQILGLWCKDVTRILRLVDCGVTDTPSMDEPPRFSLVREIYAFLNLRGYI
NAGIASEKAKSESDIKYDYELGEKKVGDVSVASAADSEEGVSVMVKNSDASNAENDVSAG
CEVILKDAEGRDPVIANNLDLPKPVELEQELVHDLEYCIPDPTQVKFVGDVPGKAASHLT
NQSRNSWGPISSDECVGDDQQQQSNSEIKKKVIVIGAGPAGLTAAKHLLRQGFTVTVLEA
RNRLGGRVHTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLICTQLGLELTVLNSDC
PLYDIITCKKVPLDMDEALEAEYNSLLDDMVLLVAQRGEHAMAMSLEEGLEYALKRRRMA
RGMDVCSEEEVLSPFERRVMNWHFANLEYGCAAMLKKVSLPNWNQDDLYGGFGGAHCMIK
GGYSTVVESLGGGLDVRLNHVVADISYSTSDIGFNGNQCAKVKVSTTNGCEFLGDAVLIT
VPLGCLKAETIKFSPPLPEWKRLSIQRLGFGVLNKIVIEFPEVFWDDSVDYFGATAEETK
WRGQCFMFWNVRKTVGAPVLIALVVGQAAVERQYMSSSDNVSHALMVLRKLFGEAVVPDP
VASVVTDWGRDPFSYGAYSYVAVGASGEDYDILAKPVGKCLFFAGEATCKEHPDTVGGAM
MSGLREAVRMIDILSDGYDFTAEVEAMEAAQRQSECENDEVGDIITRLEAVKLSDALYKS
SLDGARILTIEALLQDLFFSSKTTAGRLHVAKELLNLPAETLKSFAGTKEGLTVLNSWIL
DSMGKDGTQLLRQCVRILVVVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSIW
LEVFRKEKAANGGLKLSKSVSAVELLKRKSNKDSSSGKPPLHANNSTLDSRGNLLTAASA
AMPLQSDVNMKNDNSKQLKFELENSSKSDISSSRSRGSFGKQDAEMEDNIAMTEEEEAAF
AAAEAARAAALAAAKAYASAEAKSAMQLPKIPSFHKFARREHYAQMDECEYKKKLSGSVL
GRQDCISEIDSRNCRVRNWSVEFSAACVNLESSRMSADNLSQRSHSNEIVSQLNFREHSG
ESAPVDSSIYTKAWVDTAGSVGMKDYHAIERWRTQAAAAHVNDEEDSNTNWHKPMWNNDQ
VANESSISQVTINKEPMRNHHRGADRIKQAVVDYVASLLMPLYKARKIDKDGYKSIMKKS
ATKVMEQATDAEKGMTVSEFLDFKRRNKIRAFVDKLIERHMATKPVTKS
Download sequence
Identical sequences A0A0A0LNR1
XP_004152762.1.97903 Cucsa.159720.1|PACid:16965236

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]