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Domain assignment for A0A0A1CHH6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0A1CHH6
Domain Number 1 Region: 156-489
Classification Level Classification E-value
Superfamily gp120 core 2.26e-170
Family gp120 core 0.000000000235
Further Details:      
 
Domain Number 2 Region: 537-662
Classification Level Classification E-value
Superfamily Virus ectodomain 1.19e-58
Family Virus ectodomain 0.0000071
Further Details:      
 
Domain Number 3 Region: 84-128
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000942
Family gp120 core 0.00017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0A1CHH6
Sequence length 853
Comment (tr|A0A0A1CHH6|A0A0A1CHH6_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVKEIRKSYRHLWRWGIMLLGMLMICRAAGNLWVTVYYGVPVWKEATTTLFCASDAKAY
DTEVHNVWATHACVPTDPSPQEVVLENVTENFNIWKNNMVEQMQEDIISLWDQSLKPCVK
LTPLCVSLNCTDLGNDTNTNSSATNNSSIGNIEKGEIKNCSFNISTNLINKVEEQHAFFY
KLDVVPIDNDNTSYRLISCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCNEKKFNGAG
PCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTNNAKTIIVQLNETVEINCT
RPNNNTRKSITIGPGRAFYATNIIGDIRRAYCNISKAKWEKTLKQVADKLREQFKVETII
FNQSSGGDSEIVLHSFNCGGEFFYCNTTGLFNSTWNETTGSNNNGTIILPCRIKQIINMW
QKVGKAMYAPPISGLISCSSNITGLLLTRDGGNNNSSNNNGSEIFRPGGGDMRDNWRSEL
YKYKVVQIEPLGIAPTKAKRRVVQREKRAVGLGALFLGFLSAAGSTMGAASMTLTVQARQ
LLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAIERYLKDQQLLGIWGCSGKLI
CTTTVPWNNSWSNKTLDEVWGNMTWMQWDKEIHNYTGYIYTLIEEAQNQQEKNEQELLEL
DKWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTHHPT
QRGPDRPEGIGEEGGERDRGRSSWLVDGFLTLIWVDLRSLCLFSYHRLRDLLLIVTRIVE
LLGHRGWEALKYWWNLIQYWSQELKKSAVSLLNATAIAVAEGTDRIIEIAQRAFRAFLHI
PRRIRQGLERALL
Download sequence
Identical sequences A0A0A1CHH6

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