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Domain assignment for A0A0A1CJH6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0A1CJH6
Domain Number 1 Region: 156-495
Classification Level Classification E-value
Superfamily gp120 core 1.96e-168
Family gp120 core 0.00000000031
Further Details:      
 
Domain Number 2 Region: 543-668
Classification Level Classification E-value
Superfamily Virus ectodomain 1.74e-58
Family Virus ectodomain 0.00000967
Further Details:      
 
Domain Number 3 Region: 84-131
Classification Level Classification E-value
Superfamily gp120 core 0.00000000000000824
Family gp120 core 0.00018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0A1CJH6
Sequence length 859
Comment (tr|A0A0A1CJH6|A0A0A1CJH6_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MRVMGIRKNYQHWWRGGTLLLGMLMICSATKDLWVTVYYGVPVWKEATTTLFCASDAKAY
DTEAHNVWATHACVPTDPNPQEVFLPNVTEEFNMWKNNMVDQMHEDIISLWDQSLKPCVK
LTPLCVTLNCTDYGNDTITNGTTGNNSKEIPMEKGEMQNCSFNITTSIKDKVQKEYALFY
KIDIVPINDTTPTTGNYTNYRLISCNTSVITQACPKVSFEPIPIHFCAPAGFAILKCNDV
NFNGSGLCKNVSTVQCTHGIRPVVSTQLLLNGSLAEGEVVIRSENFTKNIKTIIVQLNET
VKINCTRPNNNTRKSIHMGPGGAFYATGEVIGDIRQAYCTLNGTKWKNTLKQIVGKLREQ
EQFENKTIVFNQSSGGDPEVVMHTFNCGGEFFYCNTTQLFNSTWNKNGEPDNIAREILLP
CRIKQIINMWQGVGKAMYAPPIRGRISCVSNITGLLLVRDGGNETNGNETFRPGGGNMKD
NWRSELYKYKVVEVEPLGIAPTRARRRVVQREKRAVTLGALFLGFLGAAGSTMGAASVTL
TVQARQLLSGIVQQQNNLLRAIDAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGIWG
CSGKLICTTNVPWNNSWSNKSLDYIWDNMTWMQWEKEIDNYTIQIYKLLEESQNQQEQNE
KELLELDKWASLWNWFTITNWLWYIKIFIIIVGGLIGLRIVFTVLSIVNRVRQGYSPLSL
QTRLPAQRGPDRPEGIEEEGGGRDRDTSGPLVDGFLAIIWVDLRSLCLFSYHRLRDLLLI
VARIVELLGRRGWEILKYWWNLLQYWSQELRNSAISLFNTTAIAVAEGTDRIIEVAQRAF
RAFLHIPRRIRQGLERALL
Download sequence
Identical sequences A0A0A1CJH6

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