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Domain assignment for A0A0A1CJN0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0A1CJN0
Domain Number 1 Region: 146-488
Classification Level Classification E-value
Superfamily gp120 core 2.65e-163
Family gp120 core 0.000000000605
Further Details:      
 
Domain Number 2 Region: 536-659
Classification Level Classification E-value
Superfamily Virus ectodomain 9.3e-59
Family Virus ectodomain 0.00000998
Further Details:      
 
Domain Number 3 Region: 84-128
Classification Level Classification E-value
Superfamily gp120 core 0.000000000000033
Family gp120 core 0.00015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0A1CJN0
Sequence length 852
Comment (tr|A0A0A1CJN0|A0A0A1CJN0_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MKVKGIRKNYQHLWRWGIMLLGMLMICSATEKLWVTVYYGVPVWKDAKTTLFCASDAKAY
ETEVHNVWATHACVPTDPNPQEVVLANVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVK
LTPICVILNCTDYVRNNTNTTISNPTEMKNCTFNITTSIKEEVKGYALFYKYDVVQIDNN
SNDTRYRLMSCNTSTITQACPKVTFEPIPIHYCAPAGFAIVKCNDKKFNGTGPCTNVSTV
QCTHGIRPVVSTHLLLNGSLAEEEVVIRSENFTNNHKIIIVQLNQSVEINCIRPNNNTRT
SIPIGPGKTIYATGEIIGDIRQAHCNISKEKWTDTLKKIVGKLGEQFNKTIIFDQPPPGG
DPEVVMHNFNCGGEFFYCNTSGLFNSTWTRNNTTGTWNSTNTTNIGNDTITLQCRIRQII
NRWQEVGKAMYAPPIAGIIRCSSNITGLLITRDGGNETVHNETFRPAGGDMRDNWRSELY
KYKVVKVEPLGIAPTKARRRVVQREKRAVGIGAVFLGFLGAAGSTMGAASLTLTVQARLL
LSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLMGIWGCSGKLIC
TTSVPWNISWSNKSLDHIWNNMTWMQWEREIDNYTGLIYTLLEESQNQQEKNEKDLLELY
KWDSLWSWFDITNWLWYIKIFIMVVGGLVGLRIVFTVFSIINRVRQGYSPLSFQTHPPAR
RGPDRPEGIEEEGGERDRDRSIRLVSGFLALFWDDLRSLCLFSYHRLRDLLLIVTRIVEL
LGHRGWEALKYWGNLLQYWGQELKNSAVSLLNAIAIAVAEGTDRIIEVVQRAFRAILNIP
RRIRQGFERALL
Download sequence
Identical sequences A0A0A1CJN0

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