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Domain assignment for A0A0A1CJT0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0A1CJT0
Domain Number 1 Region: 155-493
Classification Level Classification E-value
Superfamily gp120 core 1.77e-168
Family gp120 core 0.000000000328
Further Details:      
 
Domain Number 2 Region: 541-666
Classification Level Classification E-value
Superfamily Virus ectodomain 6.88e-60
Family Virus ectodomain 0.00000815
Further Details:      
 
Domain Number 3 Region: 84-136
Classification Level Classification E-value
Superfamily gp120 core 0.000000000000432
Family gp120 core 0.00022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0A1CJT0
Sequence length 857
Comment (tr|A0A0A1CJT0|A0A0A1CJT0_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MKVKGIRKSYQQLWRGGIMLLGILMICSAADNLWVTVYYGVPVWRDATTTLFCASDAKAY
DTEAHNIWATHACVPTDPNPQEVVLGNVTEDFNAWKNDMIDQTHEDIISLWDQSLKPCVK
LTPLCVTFNCTNYNNTTGNSTANTTSSWQRMEQGEIKNCSFNVTTNIRDKMQKEYALFYK
SDIVSIDNSNNSYRLISCNTSVITQACPKTSFEPIPIHYCAPAGFAILKCNNKTFDGKGK
CNNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSDNFSDNAKTIIVQLKEAVKINCTR
PNNNTRKSIHIAPGKAFYATDRIIGDIRQAHCNISEGAWNKTLTQIVKKLGEQFKNTTTI
VFKQSAGGDPEIVTHSFNCGGEFFYCNSTPLFNSNWTRNNGTWKLNNTSNSTEPITLQCR
IKQIVNRWQEVGKAMYAPPIRGQVNCTSNITGLLITRDGGDPNSTTETFRPGGGDMRDNW
RSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVTLGAMFLGFLGAAGSTMGAASITLTV
QARQLLSGIVQQQNNLLKAIDAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCS
GKLICTTTVPWNISWSNKSLNNIWDNMTWMEWEREIDNYTGLIYSLLEESQNQQEKNEQD
LLALDEWASLWNWFDITRWLWYIKIFIMIVGGLVGLRIVFTVFSIINRVRQGYSPLSFQT
RLPAQRGPDRPEGIEEEGGEKDRSRSGHLVDGFLTLIWIDLRGLFLFSYHRLRDLLLIVT
RVVELLGRRGWETLKYWWNLLKYWSQELKNSAVSLFNTIAIAVAEGTDRIIEVVLRVYRA
ILHIPTRIRQGLELALL
Download sequence
Identical sequences A0A0A1CJT0

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