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Domain assignment for A0A0B1PDW1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0B1PDW1
Domain Number 1 Region: 897-1160
Classification Level Classification E-value
Superfamily Terpenoid synthases 5.61e-66
Family Isoprenyl diphosphate synthases 0.0000000651
Further Details:      
 
Domain Number 2 Region: 1359-1438
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.83e-28
Family Nuclear receptor 0.0001
Further Details:      
 
Domain Number 3 Region: 74-418,449-569
Classification Level Classification E-value
Superfamily TPR-like 2.28e-28
Family HAT/Suf repeat 0.0052
Further Details:      
 
Domain Number 4 Region: 1428-1441,1604-1811
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 1.18e-24
Family Nuclear receptor ligand-binding domain 0.00085
Further Details:      
 
Domain Number 5 Region: 788-879
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 2.28e-24
Family Canonical RBD 0.0033
Further Details:      
 
Domain Number 6 Region: 683-771
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 9.4e-23
Family Canonical RBD 0.0093
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0B1PDW1
Sequence length 1824
Comment (tr|A0A0B1PDW1|A0A0B1PDW1_9BILA) Zinc finger, C4 type {ECO:0000313|EMBL:KHJ40223.1} KW=Complete proteome OX=68888 OS=Trichuris suis (pig whipworm). GN=D918_09717 OC=Trichinellida; Trichuridae; Trichuris.
Sequence
MQEEVEFRGSDEFNLDSINNDESAGDQDSRQLTSTSGGSDLSDDSDDTSDEDDDDDLVSD
DDLEIDAKQLEQLESKVESAPFDYEAHCSLVSAYRACGELEKLRLARQRFRQRLPIKTEE
CIVWIRDERSVGLPKDEIRKLFEDFLEEMPASFLLWLEYIQWSCGNMTVDEVRSLFEKAI
TAVGLHVAQADVLWSCYREYERCWTTAEQNGEVGQHQEKLLRVYRRQLSVAAEGLENVYN
EYVALLGGREVDSASKFIYESSLRELNLLRPFEKALDDSRDNPAIAYNQYIDFEMGRKNP
ARLACLFERAIADMPFNKAIWLRYLSWLDSSIKVPELCQKVFRRAARFLPTDVEIWQKSL
LGCEYNNASWDSLLDMANRAFEIETLKCTEAVELWLLHIYQCRRKCVRNSEGTEEVCKSC
SCGPRKNSRRPVCGWCVSIGGLEQIDLFVFQRFEEGAQWLKENFGDRYWDMDGWYRKCWA
RYLASDCNNMDGARSLWKEVMKGGSGRLASFWMDYIWLERQFGDHASVAELFSMASNSVT
DFPEVVFNEWLQFLREEGSIHELWSAMNRVEKHKDLLKSKNVKRKEKFEKKKKRPAKAQK
NLYNETGTAADNRGNKAKPLPPKRVSVPSPSQIDGQTEERHVDADGFLIPPLPKAARLSN
NKRDVSTPDEQQQQQQSGTQGADGAHVEGSTVFVSNLDFSLSKDQLAAVFAEVGEVKEVR
MMMLRPNRSKGYAYVEFKNSDSVAKALNLDRHLVDGRPMYVSVCRPADSKQQADTEKPST
FKYFCGLEKNKLFVKNLSSFVKEKDLEDLFKPFGKLLSVRLVLHKSGQSKGLAYIEYADE
SSAERALSKTDGIHFHNKRLSVQLSNPPPRQPSTASGAWSACFRNMVDESHYVNGYEEEL
VAPYVYVSELPAKQVRNRLIEAFNVWLQIPDDKLRSICEIVNILHNASIMIDDIEDDSVL
RRGKPVAHKMFGLASTINSANYMYFVALQSCHALGHPDAVKIFTEQMMQLHRGQGMDIFW
RDSVTCPTEEKYFEMIIKKTGGLFLLSVGLTQLFSSNKTNYDELVQKFAIYFQIRDDYAN
LTSREYADLKSFAEDLTEGKFSYPIIHAVLNSADRDEVLAILRRRVTSIELKQHCIDLLR
RSGSLEYTRRRLSLLADETYLLVVFFSVRHAACEDLLVRLSPLPIGSTLRSKQVNPANYS
VGTNLFVASLLFGRCFNQVQLDDHSFAPPPPLNESELTLAGAKFIPVTLWQAIMTNESDL
RHRHHHSSSGSKLAVADESTDRKTSSLTLCPDDSVDDEAKKICKETAADQRPMSATSFEP
FALGSVPVLQQFVQNLNQCQKLSCQPARFLSHLRESNNDLCVVCGDKASGRHYGATSCEG
CKGFFKRSIRKKIGYVCRGSRDCPVTKFHRNRCQYCRLKKCLAMGMRSESVQAERKPIAN
GNGSADVATPSSLMLNPAVSVGGGSFPNNSDEETSSHTNRALSLASEALTASCCASSSKL
DGSTNSVQGSLMAGILALNRKATNLAKLRPPAGLPPFSKLSIKVAKTDDSEPSEQDSEKV
SSDDGHSPRGSCSSTGGGGGGGAMAFNSSDPPVRILTPQSAIFELPVPLPLPSVLNMQYI
CETASRLLFLSVHWLKSVPSLELQPDSVEEMVLKQRWCEIFLLGLMQCASQFCLGNMLTA
MATYLHTCFLLGALSVEQYEEVQEHITCLQAFLQRVEEAKPTDVEFGYLKLIAFSATDSG
STFNVAHLANFQRQTCRELCGQVDDDRYTSLLLLLPTLRSFNKQIVVELFFSGLIGNLQI
ENVIPFILKMDVLQIFGQVVPGDL
Download sequence
Identical sequences A0A0B1PDW1

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