SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0C9LYI8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0C9LYI8
Domain Number 1 Region: 313-440,481-704
Classification Level Classification E-value
Superfamily Tex N-terminal region-like 4.05e-27
Family Tex N-terminal region-like 0.011
Further Details:      
 
Domain Number 2 Region: 718-884
Classification Level Classification E-value
Superfamily Ribonuclease H-like 9.1e-23
Family Tex RuvX-like domain-like 0.011
Further Details:      
 
Domain Number 3 Region: 888-987
Classification Level Classification E-value
Superfamily RuvA domain 2-like 0.000000000006
Family Tex HhH-containing domain-like 0.0043
Further Details:      
 
Domain Number 4 Region: 1234-1323
Classification Level Classification E-value
Superfamily SH2 domain 0.000000311
Family SH2 domain 0.0066
Further Details:      
 
Domain Number 5 Region: 996-1091
Classification Level Classification E-value
Superfamily RuvA domain 2-like 0.00000131
Family Tex HhH-containing domain-like 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0C9LYI8
Sequence length 1429
Comment (tr|A0A0C9LYI8|A0A0C9LYI8_9FUNG) Transcription elongation factor Spt6 {ECO:0000256|PIRNR:PIRNR036947} KW=Complete proteome; Reference proteome OX=1603295 OS=fungal sp. No.11243. GN=ANO11243_090500 OC=Eukaryota; Fungi.
Sequence
MANTYFDLAADLGSEEDDEDYDEETGEATEKPKKAKAAVDDSSEEEDDDDDEEEQRKVAE
GFIADEDDEEEEREDREARRRRKKRQREERENEELLDEDDLDLIGLGHDDRTEEQSKFKR
LKRGHRDDRQRSEARGVEEIFAEDEDVQEERRGLGRGLADEFDDFIEDDEFPDEEGDVRD
DMEVARPARRGFVDPLKMHSGMDEAAQEDMMAAFGDGTEYDWALQLQDEQDEEQDDPDKV
LELKDVFEPSQLVDKMLTEDDNLIRNTDVPERYQIARKAYKELDLTPDETDQRLKEEASW
MCSLMLPKRRLASDMLEPFENTVRNVLRFINVDNLEVPFIIHNRKDYLIHEDRVPSSPDP
SNPDKPALEIKASRLLQPSDLWEITELDLKYRALTEKRDTLEKAYASLKQQGVQDELFDE
MIPAAQVMEELQDVQDYLHFQYSAQLKDAQAMDIEVDGANGTNGVNGTQKRARSSRNIWD
RVRAGRAYHMVKSFGITADAVAQNALKAGKKVYTEDPAERPDDMADSLVDADQFSTGAQV
LQAAKSMYAEEMTMSPRMRKLVRQTYYADGVFDCTRTEKGLKRIDEEHPFYEFKYLKSQD
FGRLVREPDLFLRMLKAEEEGLIEVSLRLQNPKSFRQTLFEQIESDNVSEAADAWNSLRR
EVVDLALQRLSRLIAKGCKESLRTECEAKIAEKCRNEYANKLDQAPYKPRGMIAGTTPRV
LALSNGAGQRGDAVCWAYVDENGRVLENGKMTDLRLGNPEKYIPDGKDVTPFADLVNRRK
PDVLAVSGWSVEARRLYKDLQDIIEQRDLRGTPFEDEDGEERSEKLDIVMANDEVARLYH
TSNRAVAEYSTIPALTRYCIGLAKYLQSPLKEYAALGKDIISISFSPHQSLVPQDKIHRH
LEMAMIEIVNLVGVEINEAATDSYTANLLQYVCGLGPRKAAQMLQVINRNGGEVLTRDEL
VGDLERNKRPTVGPKVFENCASFVYISYDDAEPEADYLDNTRVHPEDYDTARKIVADTLD
LDEEDIKAEQEENGPNALVRKLIKDDAQERLNDLLLDDYADEIFRKFGLKKKATLELIRN
DLQQPYEELRQPFYFISTDETFTMLTGETPESLVAEMIVPVSVRRTFSDHLDVRLDCGIE
GTILEPDFPDGVGPHGAEPRSVWQPQQTIQAKLLSLDRKKFSASLSLRDSEMSRPYRREF
DHEPGMWDEQQEAQDRKEQERGRQGKTGRAQRVIKHPLYQPFNSAQAQEFLGAQGRGDVV
IRPSSKGLDHLAVTWKVADNIYQHLDVLELDKENEFSVGRTLKVSGKYTYTDLDELIVLH
VKAMSKKVEEMMGDERFQNGSKAQTEQWLTTYTEANPKRSMYAFCINPKYPGYFFLCFKA
GLDAPLSSWPVRVIPNAFELQKNAYPDMRALKNGFKVLISRKMGVNGGR
Download sequence
Identical sequences A0A0C9LYI8

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]