SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0D0VTR1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0D0VTR1
Domain Number 1 Region: 228-293,322-385,431-475
Classification Level Classification E-value
Superfamily PAP/OAS1 substrate-binding domain 5.81e-23
Family RNA editing terminal uridyl transferase 2, RET2, domain 2 0.034
Further Details:      
 
Domain Number 2 Region: 50-135,163-225
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 3.71e-18
Family Catalytic subunit of bi-partite nucleotidyltransferase 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0D0VTR1
Sequence length 489
Comment (tr|A0A0D0VTR1|A0A0D0VTR1_CRYGA) Unplaced genomic scaffold supercont1.2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR49879.1} KW=Complete proteome OX=1296109 OS=Cryptococcus gattii CA1280. GN=I312_00972 OC=Cryptococcus gattii species complex.
Sequence
MDILDEQIMDILDEPLPGHMESISAFRTLLKSPSDRVACPDSIARPVEPDALQTSVIESW
KATEPSRESRLRLLRLLSDLTYIINSKYKGYEEGGLKRYWVDVFGSVSWAGDTGHSGDLD
LIVLDRKLLHGYAPVFWRTPPGEPLNTPASHKRNNIPTPLKHLSEVYDTFSVAECLREAG
FEDVESIAAASTPINKFKYRDQECDLNVNDLGGWYNSSLLLHYCRLAPYVLRPMVHALKL
WASSHKLNDPSGARGPATMSSYCLTLMAIAYLQHIGYLPNLQADINVPEVCRPEDTSEHD
VVWVSWGKEQGVKAHVGFGLSPPDDWKPSIPNLTAADAIRGFFEFFSLNGSAPLRGEKFD
RVTQIVSILQGGIVPRAKEYGQEVRESQQRRDTLLNLGVSLERIRQAEDMIRQERFKEEE
RMGKGDRGIQPRNWGEKKLVVQDPFLWFKNCAGMMSREGLDRWWTTVDNTHRVIKLKGKS
FTLADLLML
Download sequence
Identical sequences A0A0D0VTR1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]