SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0D3A616 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0D3A616
Domain Number 1 Region: 277-335
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000000612
Family ZZ domain 0.0099
Further Details:      
 
Domain Number 2 Region: 3-88
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000000000179
Family PB1 domain 0.028
Further Details:      
 
Domain Number 3 Region: 688-725
Classification Level Classification E-value
Superfamily UBA-like 0.0000000349
Family UBA domain 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0D3A616
Sequence length 733
Comment (tr|A0A0D3A616|A0A0D3A616_BRAOL) Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo1g039240.1} KW=Complete proteome; Reference proteome OX=109376 OS=Brassica oleracea var. oleracea. GN= OC=Brassica.
Sequence
MDSTTALVVKVSYGGVLRRFRVPFKANGQLDLDMAALRGKIAALFNLPLDAEFSLTYSDE
DGDVVALVDDNDLSDVTNQRLKFLKITVQSNGGVPVNSFASDSSGSSSASVMPDNQNPVS
KIQKGFNDVMMAVPNPMRDTISKVYIDLTSKAASSSPVVGELFDCINKLGKLSSPQESSP
CSPVAKPGSSGPSLSREVPSTDEKKDASKKTQAGKKPANLKEPVADSTSCGLGASFNECP
FSGSTVIDSTPNPTSHNKHARRVCHSKKTNNGDYWASLGVFHKGIRCDGCGVLPITGPRF
KSKVKEDYDLCTICFSVMGNEGDYTRMDKPVSAQQLHPFRGLPTPFSNPWLGHVPRPHHG
GLHFRCTRPKLDSRFVLDVNVLDGTVVAPSAPFTKIWKMRNNGSLVWPHGTQIVWIGGDR
FSSSLSVDLQIPVEGVPINSELDVKVEFVAPESPGRYISYWRMASSNGLKFGQRVWVLIH
VLTKSSPPFSWNFVFLNHLIPFFFCGLRGQVDASLKSSVENEFHGLNLNASPEENFAREF
SGINVNHVPAQPCSPSVNPGIVKGADVEPEASSGSNIPMKDDLFVGEVEPVVPNTLTPSS
SSSSSSFNIIEFPNKPTTVEALGGGSSSAKNIPVPLQEDIEKNDVEITMLKELEEMGFKE
IDLNKEILRDNEYNLEQSVDALCGVSEWDPILEELQEMGFCDDVTNKRLLKKNNGSIKGV
VMDLLTGEKEKEA
Download sequence
Identical sequences A0A0D3A616

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]