SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0D3DQ47 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0D3DQ47
Domain Number 1 Region: 239-363
Classification Level Classification E-value
Superfamily PAP/OAS1 substrate-binding domain 3.26e-47
Family Poly(A) polymerase, PAP, middle domain 0.0000129
Further Details:      
 
Domain Number 2 Region: 88-233
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 2.78e-38
Family Poly(A) polymerase, PAP, N-terminal domain 0.0000442
Further Details:      
 
Domain Number 3 Region: 365-490
Classification Level Classification E-value
Superfamily PAP/Archaeal CCA-adding enzyme, C-terminal domain 1.47e-35
Family Poly(A) polymerase, PAP, C-terminal domain 0.0022
Further Details:      
 
Domain Number 4 Region: 12-78
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 0.00000474
Family Poly(A) polymerase, PAP, N-terminal domain 0.0029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0D3DQ47
Sequence length 722
Comment (tr|A0A0D3DQ47|A0A0D3DQ47_BRAOL) Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo8g067610.1} KW=Complete proteome; Reference proteome OX=109376 OS=Brassica oleracea var. oleracea. GN= OC=Brassica.
Sequence
MVRLMANVQQRYGITEPISLGGPTELDVVKTRELEKYLQDVGLYEGKEEAVRREEVLGRL
DQVIRNCAYGFFIDVCNKSMVRSSLLCVQIVKIWIKTISRAKGLNDQLLHEANAEIFTFG
SYRLGVHGPGADIDTLCVGPRHATREGDFFGELQRMLSEMPEVTELHPVPDAHVPLMGFK
LNGISIDLLYAQLPLWVIPKDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPNIEVS
GFLGGINWALLVARICQLYPNALPNMLASRFFRVYTQWRWPNPVLLCSIDGGSFGLQVWD
PRRNPKDRLHIMPIITPAYPCMNSSYNVSASTLRIMTGEFQRGKDICEAMEANKADWDTL
FEPFAFFEAYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHTHD
YQDASRPLHCSYFMGLQRKQGVPAAEGEQFDIRRTVDEFKHTVNSYTLWIPGMEISVSHI
KRRSIPSFVFPGGVRPSHASKGTWDSKRRSENRIASTASAATTNTNEASSESKGGSSSSG
DGKMRKRGDDETLTDQLRNSKRVGVAVPVENGEGGSPDPSVGSVCSSPLKDCLTDAKSDP
ISKDPPENVVLFSKDTPESPPLEKIATLQAQSQETEELEDSFDFGNQVIEQISNKDTILA
ASGTIPPFEATTSNGSPFSNGAVEELEVLPMGHPEVTHRALVQQRKPIIKLNFTSLGKTD
GK
Download sequence
Identical sequences A0A0D3DQ47

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]