SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0D9ZW24 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0D9ZW24
Domain Number 1 Region: 20-254
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.4e-56
Family DNA replication initiator (cdc21/cdc54) N-terminal domain 0.00025
Further Details:      
 
Domain Number 2 Region: 359-657
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.14e-39
Family Extended AAA-ATPase domain 0.021
Further Details:      
 
Weak hits

Sequence:  A0A0D9ZW24
Domain Number - Region: 717-789
Classification Level Classification E-value
Superfamily Variable surface antigen VlsE 0.0471
Family Variable surface antigen VlsE 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0D9ZW24
Sequence length 814
Comment (tr|A0A0D9ZW24|A0A0D9ZW24_9ORYZ) DNA helicase {ECO:0000256|SAAS:SAAS00536514} KW=Complete proteome; Reference proteome OX=40148 OS=Oryza glumipatula. GN= OC=Oryzoideae; Oryzeae; Oryzinae; Oryza.
Sequence
MEAFGGFFVDEKAARVENIFLEFLRRFKEADAAEAFYETELEAMRSRESTTMYVDFAHVM
RFNDVLQKAISEEYLRFEPYLRNACKRFVMEQRTGENRAPIISDDSPNKDINIAFYNIPM
LKRLRELGTAEIGKLTAVMGVVTRTSEVRPELLQGTFKCLDCGNVVKNVEQQFKYTEPII
CVNATCQNRSKWALLRQESKFTDWQRVRMQETSKEIPAGSLPRSLDVILRHEIVEKARAG
DTVIFTGTVVAVPDVMALTSPGERAECRREAPQRKNGSGVQEGVKGLKSLGVRDLSYRLA
FVANSVQVADGRREVDIRDRDIDGDDSERQKFTEEEEDEVVRMRNVPDFFNKIVDSICPT
VFGHQEIKRAILLMLLGGVHKITHEGINLRGDINVCIVGDPSCAKSQFLKYTAGIVPRSV
YTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIKDQVAIHEAM
EQQTISITKAGIQATLNARTSILAAANPTGGRYDKSKPLKYNVALPPAILSRFDLVYIMI
DEPDENTDYHIAHHIVRVHQKREEALAPAFSTAELKRYIAFAKSLKPQLSSEAKKVLVES
YVTLRRGDSTPGTRVAYRMTVRQLEALIRLSEAIARSHLERVIMHVESSEVDLSDFQDAD
DGTNVPADNDAGQPTEMDAAPQQDGPENEQAADTGKKKLVITEEHFQRVTQALVMRLRQH
EESVTKDGDGLAGMKQGDLIIWYVEQQNAQGAYSSTAEVKEEVKCIKAIIERLIQRDGHL
IVIDEGAAPAADDGAARRTSESRILAVNPNYVID
Download sequence
Identical sequences A0A0D9ZW24 A0A0E0PJC1
OGLUM05G08620.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]