SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0E1NSB8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0E1NSB8
Domain Number 1 Region: 249-422
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 4.84e-47
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.00000645
Further Details:      
 
Domain Number 2 Region: 44-169
Classification Level Classification E-value
Superfamily Aspartate receptor, ligand-binding domain 0.0000000000000314
Family Aspartate receptor, ligand-binding domain 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0E1NSB8
Sequence length 428
Comment (tr|A0A0E1NSB8|A0A0E1NSB8_YERPA) Uncharacterized protein {ECO:0000313|EMBL:AJJ79800.1} KW=Complete proteome OX=360102 OS=Yersinia pestis bv. Antiqua (strain Antiqua). GN=CH58_446 OC=Yersiniaceae; Yersinia.
Sequence
MKIAPEPNKDTKVSFINNMRLVTLFIVILAGILLLFAAAIGTSGYFLKQSNQSLAQATQE
IDIRQGLSNSSNHLRTARLILIQAASSARIGDATGYQQGLKNAEGRIAQSQQMFDLYYNR
PTKSETDMALDVPLKKAYEQYRDDGMKPMLAATKEGHFEEVISLDAEKISLLDDGYNEPL
LKAVKYRTEQANQINQSAHQEARLGYILMAGAFVLVILLTMIAFLVISKVIINPINWLVT
RIQWIAQGDLTQSPVSFGRNEIGVLGSNIQQMQDALAITVEAVRSSAESIYQGSSEIALG
NTDLSARTEQQAASLEQTAASMEQLTATVKQNAENAHHASQLAANASGKAAQGGDIVSDV
VSTMDKISLSSMKIAEITNVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRHLA
QRRCRKRN
Download sequence
Identical sequences A0A0E1NSB8

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]