SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0F3LTL7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0F3LTL7
Domain Number 1 Region: 4-321
Classification Level Classification E-value
Superfamily Tex N-terminal region-like 3.79e-120
Family Tex N-terminal region-like 0.00000000594
Further Details:      
 
Domain Number 2 Region: 322-468
Classification Level Classification E-value
Superfamily Ribonuclease H-like 4.3e-49
Family Tex RuvX-like domain-like 0.00000228
Further Details:      
 
Domain Number 3 Region: 469-557
Classification Level Classification E-value
Superfamily RuvA domain 2-like 5.34e-28
Family Tex HhH-containing domain-like 0.00014
Further Details:      
 
Domain Number 4 Region: 637-722
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 8.95e-25
Family Cold shock DNA-binding domain-like 0.0000297
Further Details:      
 
Domain Number 5 Region: 559-631
Classification Level Classification E-value
Superfamily RuvA domain 2-like 8.89e-19
Family Tex HhH-containing domain-like 0.0000986
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0F3LTL7
Sequence length 776
Comment (tr|A0A0F3LTL7|A0A0F3LTL7_9GAMM) Transcription accessory protein {ECO:0000313|EMBL:KJV46910.1} KW=Complete proteome OX=1628190 OS=Pantoea sp. BL1. GN=VH86_18720 OC=Erwiniaceae; Pantoea.
Sequence
MKDSLSQIIASELKARADQVDAAVRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLESRLG
YLRELEDRRQSILKSIDEQGKLTPELATAINGTLNKTELEDLYLPYKQKRRTRGQIAIEA
GLEPLAETLWSDPSQEPESLAANFVDADKGVADVRAALDGARYILMERFAEDATLLAKVR
DYLWKNAHLVARVVEDKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA
DPQFEEAPRESHGETLIADHLQLRLNNAPADSWRKAVVSWTWRIKVLLHLETELMGTIRE
RAEDEAINVFARNLHDLLMAAPAGMRATMGLDPGLRTGVKVAVVDATGKLVAHDTIYPHT
GQVAKAASAVAALCIKHQVELVAIGNGTASRETERFFLDVQKQFPQINAQKVIVSEAGAS
VYSASELAALEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK
KLDAVVEDCVNAVGVDLNTASVALLTRVAGLTRMMAQNIVTWRDENGRFQNRQQLLKVSR
LGPKAYEQCAGFLRINHGDNPLDASTVHPEAYPLVERILAATEQALSELMGNPGGLRDLN
ARDFTDERFGLPTVTDIMKELEKPGRDPRPEFKTAQFAEGVETLNDLLPGMILEGAVTNV
TNFGAFVDIGVHQDGLVHISSLSDKFVEDPHQVVKAGDIVKVKVMEVDMQRKRIALTMRL
DEQPGESNARGGNNRSSGKENARPAANSKGRGKPANAPAGNSAMGDALAAAFGKKR
Download sequence
Identical sequences A0A0F3LTL7
WP_045833805.1.13254

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]