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Domain assignment for A0A0F5VIJ5 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0F5VIJ5
Domain Number 1 Region: 3-143
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 4.91e-48
Family Ribonuclease PH domain 1-like 0.000015
Further Details:      
 
Domain Number 2 Region: 298-491
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 7.59e-46
Family Ribonuclease PH domain 1-like 0.0000184
Further Details:      
 
Domain Number 3 Region: 144-234
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.19e-29
Family Ribonuclease PH domain 2-like 0.0012
Further Details:      
 
Domain Number 4 Region: 449-547
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 6.17e-28
Family Ribonuclease PH domain 2-like 0.0000996
Further Details:      
 
Domain Number 5 Region: 606-693
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.91e-22
Family Cold shock DNA-binding domain-like 0.0000556
Further Details:      
 
Domain Number 6 Region: 237-319
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 2.12e-19
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0019
Further Details:      
 
Domain Number 7 Region: 553-621
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 1.37e-16
Family Eukaryotic type KH-domain (KH-domain type I) 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0F5VIJ5
Sequence length 703
Comment (tr|A0A0F5VIJ5|A0A0F5VIJ5_9GAMM) Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595} KW=Complete proteome; Reference proteome OX=265726 OS=Photobacterium halotolerans. GN=KY46_02300 OC=Vibrionaceae; Photobacterium.
Sequence
MNPIVKTFQYGNHTVTLETGVMARQATAAVMASMDDTSVFVSVVGKKEAVEGQDFFPLTV
NYQERTYAAGKIPGGFFKREGRPSESETLTARLVDRPIRPLFPDAFKNEVQVIATVVSVN
PDVSPDIVTMIGTSAALAISGIPFNGPIGAARVGYINDQLVLNPSNKELAESRLDLVVAG
TESAVLMVESEADRLTEEQMLQAVVFGHDQQQTVINAIKEFAAEVATPAWDWVAPSVNTD
LKARVAAKAEARLTDAYQITEKMARYEKVGAIKAEVIAELLAEDEALDEREIRDMLGSLE
KNVVRSRIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQRD
AQILDELTGERKEHFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIQAVMPTVDEF
PYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKEGNDFVVLSDI
LGDEDHLGDMDFKVAGTNDGITALQMDIKIEGITKEIMQIALNQAKGARIHILGVMDQAI
STARDDISQFAPRIHTMKINPEKIKDVIGKGGAVIRQLTEETGTTIEIEDDGTVKIAATE
GTAAKEAIRRIEEITADVEVGRIYTGKVVRIVDFGAFVSVIGTKEGLVHISQIAQERVEK
VSDYLQMGQEVQVKVLEIDRQGRIRLSMKEAQPEQAPAAGEDA
Download sequence
Identical sequences A0A0F5VIJ5
WP_046218976.1.89714

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