The results are sorted from lowest E-value to highest E-value. Strong classifications have a low E-value. Weak classifications have an E-value greater than 0.0001. Weak hits are shown in gray. Weak hits are not shown on the domain architecture.
The family level classification is conditional on the domain being a member of the specified superfamily. There is a possibility that the selected domain is a member of a sub-family for which no structure has yet been solved.
| Sequence: |
A0A0F6YJL5 |
| Domain Number 1 |
Region: 229-305 |
| Classification Level |
Classification |
E-value |
| Superfamily |
Prokaryotic type KH domain (KH-domain type II) |
6.21e-30 |
| Family |
Prokaryotic type KH domain (KH-domain type II) |
0.00012 |
| Further Details: |
|
| |
| Domain Number 2 |
Region: 8-63,111-150 |
| Classification Level |
Classification |
E-value |
| Superfamily |
Transcription factor NusA, N-terminal domain |
5.14e-26 |
| Family |
Transcription factor NusA, N-terminal domain |
0.00038 |
| Further Details: |
|
| |
| Domain Number 3 |
Region: 159-227 |
| Classification Level |
Classification |
E-value |
| Superfamily |
Nucleic acid-binding proteins |
2.29e-17 |
| Family |
Cold shock DNA-binding domain-like |
0.0032 |
| Further Details: |
|
| |
| Domain Number 4 |
Region: 307-369 |
| Classification Level |
Classification |
E-value |
| Superfamily |
Prokaryotic type KH domain (KH-domain type II) |
2.42e-16 |
| Family |
Prokaryotic type KH domain (KH-domain type II) |
0.00024 |
| Further Details: |
|
| |
| Domain Number 5 |
Region: 386-435 |
| Classification Level |
Classification |
E-value |
| Superfamily |
Rad51 N-terminal domain-like |
0.00000204 |
| Family |
DNA repair protein Rad51, N-terminal domain |
0.047 |
| Further Details: |
|
| |
The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by 
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Information Content (IC) is an information theoretic score measured in bits of how informative it is to assign a given ontological term to a domain archtecture. The higher the score the more informative it is to talk about the term given the domain architecture.
H-score (hypergeometric score) indicates the strength of assigning an ontological term to this domain architecture. Assignments with higher scores are of a better quality. Details for the methodology be found on the dcGO website.
| Biological Process |
IC (bits) |
H-Score |
| Cellular Component |
IC (bits) |
H-Score |
| Molecular Function |
IC (bits) |
H-Score |
