SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0H5PN74 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0H5PN74
Domain Number 1 Region: 37-338
Classification Level Classification E-value
Superfamily Tex N-terminal region-like 2.35e-106
Family Tex N-terminal region-like 0.0000000335
Further Details:      
 
Domain Number 2 Region: 339-490
Classification Level Classification E-value
Superfamily Ribonuclease H-like 5.31e-48
Family Tex RuvX-like domain-like 0.00000203
Further Details:      
 
Domain Number 3 Region: 491-579
Classification Level Classification E-value
Superfamily RuvA domain 2-like 5.67e-27
Family Tex HhH-containing domain-like 0.00017
Further Details:      
 
Domain Number 4 Region: 661-743
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.12e-23
Family Cold shock DNA-binding domain-like 0.0000439
Further Details:      
 
Domain Number 5 Region: 581-653
Classification Level Classification E-value
Superfamily RuvA domain 2-like 9.34e-20
Family Tex HhH-containing domain-like 0.00012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0H5PN74
Sequence length 808
Comment (tr|A0A0H5PN74|A0A0H5PN74_NOCFR) 30S ribosomal protein S1 {ECO:0000313|EMBL:CRY83936.1} KW=Complete proteome OX=37329 OS=Nocardia farcinica. GN=ERS450000_05765 OC=Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.
Sequence
MLPLVTTAPEIASSETNSTDTTAAPVGTLAGPAGVGSRIAEELGVRESQVRAAVELLDAG
STVPFIARYRKEVTGGLDDAQLRTLEERLHYLRELDERRAAIIESIRAQGKLDDELHRSL
LLAETKARLEDIYLPYKPKRRTKAQIAREAGHEPVADALLADPTTDPAQYTAEQLDGARA
ILVERFAEDADLVGELREMMWNRGQLTSTVRPGKEEAGAKFADYFEFSEAFSSLPSHRVL
ALFRGEKEEVLSLQLEPDTEELAPGERSVYEGRIAAKFGIADRGRPADSWLLDTVRWAWR
TKLQVSLGIDTRMRLRQAAEKDAVDVFAANLRDLLLAAPAGTRTTMGLDPGYRTGVKVAV
VDATGKVVATEVIYPHKPQGQTEKSLAVLGALVARFGVELIAIGNGTASRETDALVAELI
SRIGATSDKKPTKVVVSEAGASVYSASAYASQELPELDVSLRGAVSIARRLQDPLAELVK
IDPKSIGVGQYQHDVSETLLARSLGAVVEDAVNAVGVDVNTASVPLLSRVSGIGSAVAES
IVAHRDQNGPFRSRTALLDVPRLGPKAFEQCAGFLRIRGGDDPLDTSAVHPEAYPVVRRI
LEATGRRVDELIGNTGVLRSLRPAEFTDEKFGVPTVTDIIGELEKPGRDPRPEFKTAEFA
AGVEKVADLKPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSHSFVKDPREVVKSGD
VVKVKVLEVDVARQRIGLSLRLDDEPGAAKGERGGQREGGRRGGSGGAGGGQRQNGQGRQ
QSRNQGRRNAPAPSGSMADALRRAGFGK
Download sequence
Identical sequences A0A0H5PN74

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]