SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0J3V992 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0J3V992
Domain Number 1 Region: 110-439
Classification Level Classification E-value
Superfamily IpaD-like 1.15e-77
Family IpaD-like 0.0000654
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0J3V992
Sequence length 449
Comment (tr|A0A0J3V992|A0A0J3V992_ECOLX) Type III effector protein IpaD/SipD/SspD {ECO:0000313|EMBL:KME62177.1} KW=Complete proteome OX=562 OS=Escherichia coli. GN=SM09_04643 OC=Enterobacteriaceae; Escherichia.
Sequence
MINKDNNLNIDILRQQNANIPLKEASSQSEEPHQLENSKSEGNLYNSASKDNNIGAMLKK
DVEKLSTLVSERSPRNEDWKCQHDIQLNFVKNMLRNFPTENLSEKGSALLHESYSLIKNV
LQLTENVNTIDGKLKDPAKILTLHNSVRKTLANVADNTTGSSAMASTKGTLNHAIASLDS
SAPEVRSSATSSTLTASSSNEFKSDKYICSDIADLMSVLGSDYLEIYANSVEIMSAYWQD
FSEHIQSNMGKWTHSNKKGDAIVFDVNAFQKALMHFYYIDKYPNGDFHYHYNPDYVLYPP
APADKIGVPLEEAEKWCAALGLPVIPPDPKHRTPSPIVEVEPQGSGLYVIIPNPQIIDSM
SQSSDSMVHRDDKGKEKNISKEFTGYEISTAEYQAWLAGYNSQAENMKTDVQVITTKYST
ANSTYDTIIKLLSSTITALFDSAKDYLCF
Download sequence
Identical sequences A0A0J3V992
WP_023144495.1.52568 WP_023144495.1.88717

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]