SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0J8QJQ1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0J8QJQ1
Domain Number 1 Region: 418-585
Classification Level Classification E-value
Superfamily PAP/OAS1 substrate-binding domain 4.45e-43
Family RNA editing terminal uridyl transferase 2, RET2, domain 2 0.0075
Further Details:      
 
Domain Number 2 Region: 302-413
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 3.79e-19
Family Kanamycin nucleotidyltransferase (KNTase), N-terminal domain 0.088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0J8QJQ1
Sequence length 901
Comment (tr|A0A0J8QJQ1|A0A0J8QJQ1_COCIT) Poly(A) RNA polymerase cid13 {ECO:0000313|EMBL:KMU72634.1} KW=Complete proteome; Reference proteome OX=454286 OS=Coccidioides immitis RMSCC 3703. GN=CISG_09727 OC=Eurotiomycetidae; Onygenales; Onygenales incertae sedis; Coccidioides.
Sequence
MPNVIEGESHARETSGHDEFPPSYVCILFAQQPASSLRQWQRAGEKPVPAMLEQRDPSVG
QGLMWWWCRVSIQHFCGGMHGTHARLLPLPAASSRSRRPSFTPTAFSGTTRPPRTFTNPS
FPKNSSRGHQDLRRSAPVLNLDNSDAPSALSSIVGGCLMGAEVYGDAASSHTEGDSSPIA
SETSTNMSWPIPADAHSQLPPRPALTTQQSSSVPATPFHHPRGLRFPSRSHSRSPSPNRR
SSSPRSAHSELNHILPLRKQYGGCKYETAMAHFRRRMPYSLGADLLPEEQGPLKDKLAPE
DEERLTSHMKELYKKLLPSAESEQRRIKFVKKLENLLNTQWPGNDIKVHVFGSSGNKLCS
SDSDELEHVCLLADFLAKIPIVKIWDPELQVACDMNVNNTMALENTRMIRTYVEVDERVR
PLAMIVKHWTKQRILNDAALGGTLSSYTWICLIINFLQTRSPPIVPSLQKRAISRRKQQG
NGQSSSSFDDNLEELASFGHKNKSTLGELLFQFFRYYGHEVDYEKNVMSVREGKLVSKEG
KGWHLLQNNRLCVEEPFNTSRNLGNTADDTSFRGLHLELRRAFEAVAIGDLGKCCERYEY
PPEEERTWERPAPQPRAILTPMPALPSRGGRGGGRGGRHTNHYHRGPNNMGRRASNTANR
NNIRSANPSFTADIAFQAQQAQSILHDHLYQRIQILQKQEQELRMQLQNQALMTGRAPPT
LLRQPYLQFTLPQHENISPEENPRVRASSVNQPPLTAPIRQNVFFNTSYVPVTLPGVQGT
NTNPPSPSLPSAVPDVRRSHRRSSVANDSPRGLRAQSQPARPVPSVMLPNFPAVQQDMNS
RRSPECPPRSVTEGESYLPNGVAIPKPTFGDENLPSEFYTTTWVIPRSSGLIFTGTRYSR
L
Download sequence
Identical sequences A0A0J8QJQ1
CIST_09767

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]