SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0K0UZ11 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0K0UZ11
Domain Number 1 Region: 152-491
Classification Level Classification E-value
Superfamily gp120 core 1.67e-175
Family gp120 core 0.000000000164
Further Details:      
 
Domain Number 2 Region: 539-664
Classification Level Classification E-value
Superfamily Virus ectodomain 5.66e-58
Family Virus ectodomain 0.00000937
Further Details:      
 
Domain Number 3 Region: 84-131
Classification Level Classification E-value
Superfamily gp120 core 0.0000000000000102
Family gp120 core 0.00017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0K0UZ11
Sequence length 851
Comment (tr|A0A0K0UZ11|A0A0K0UZ11_9HIV1) Glycoprotein 120 {ECO:0000256|HAMAP-Rule:MF_04083} OX=11676 OS=Human immunodeficiency virus 1. GN=env OC=Lentivirus; Primate lentivirus group. OH=9606
Sequence
MKVRGIRKNYQHLWRWGMMLLGILMICSATDKSWVTVYYGVPVWKEATTTLFCASDAKAY
ETEEHNVWATHACVPTDPNPLELNLENVTENFNMWKNSMVEQMQEDIISLWDQSLKPCVK
LTPLCVTLNCTDYGNDTTSNNSSGWEIMEKGEIKNCSFNITTSIRDKMKKEYALFYSLDV
IQIDNDNNSKGNNTSYRLRSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNG
TGSCKNVSTVQCTHGIKPVVSTQLLLNGSLAKEEVVVRSENFTNNAKIIIVQLNESVAIN
CTRPNNNTRKGISIGPGRAFYATGDIIGDIRQAHCNISREDWNNTLKRVAEKLREQFKNK
TIAFNQSSGGDPEIVMHTFNCGGEFFYCNTTKLFNSTWYSNTTDTDNTTGNITLPCRIKQ
VINMWQEVGKAMYAPPIRGQIRCSSNITGLLFTRDGGKNNTNGTETFRPGGGDMRDNWRS
ELYKYKVVKIEPLGVAPTKARRRVVQREKRAVGIGAVLLGFLGAAGSTMGAASITLTVQA
RQLLSGIVQQQTNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYLQDQQLLGVWGCSGK
LICTTNVPWNTSWSNKSLNDIWDNMTWMEWEREINNYTHIIYDLLAESQNQQEKNEQDLL
ALDKWASLWSWFDITNWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTQF
PAPRGPDRPEGIEEGGGERDRGRSGQLVDGFLAIFWVDLRSLIIFLYHRLRDLLLIVTRI
VELLGRRGWEALKYWWNLLQYWSQELKNSAVSLLNATAIAVAEGTDRIQRFFRAILHIPT
RIRQGFERALL
Download sequence
Identical sequences A0A0K0UZ11

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]