SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0K3CLB1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0K3CLB1
Domain Number 1 Region: 40-190
Classification Level Classification E-value
Superfamily Rap30/74 interaction domains 1.07e-19
Family Rap30/74 interaction domains 0.0033
Further Details:      
 
Domain Number 2 Region: 275-340
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 1.03e-16
Family DNA-binding domain from rap30 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0K3CLB1
Sequence length 409
Comment (tr|A0A0K3CLB1|A0A0K3CLB1_RHOTO) BY PROTMAP: gi|342319205|gb|EGU11155.1| Transcription initiation factor IIF subunit beta [Rhodotorula glutinis ATCC 204091] {ECO:0000313|EMBL:CTR09482.1} KW=Complete proteome OX=5286 OS=Rhodosporidium toruloides (Yeast) (Rhodotorula gracilis). GN=BN2166_0053430 OC=Microbotryomycetes; Sporidiobolales; Sporidiobolaceae; Rhodotorula.
Sequence
MAFAFRKDALPEEFEAEHGTIDLTDDTKPGTGGAGGDDGEDEDLDLGRAKQRVWLCKVPR
FLLEKWQQAQSEGEILGRLRVWDEKDASGQPKIAVILQDSPSTSSQPTPGPSSSRDSKPD
LKGKRPASMSAGDGVPTEYKLTMQNSESRNLFVFGEKVEEVMESGEEGARKKRRITSLLG
TVAHECSLTPSISSADASAAYARILRERQRKAAEPKRTLKRLEVDDATANRLASGMGAAG
IKGRVATFNELFFIRAQNTSSKAKPGSSAAAQRNTKMEKPALLDEIFTRFSSAPYWSFRT
LNDHLRQPQTYLREVLGEVAHLVPKGPYANMWALKPEFKGTQGVRSVGAANAGPGGSTSA
SSGRTEARAGVKQETEAILGNVPAVKKEERADEYGGGDDDSDDDLEMVS
Download sequence
Identical sequences A0A0K3CLB1 G0T1E8

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]