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Domain assignment for A0A0M1IHF4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0M1IHF4
Domain Number 1 Region: 1-129
Classification Level Classification E-value
Superfamily Transcription factor NusA, N-terminal domain 5.89e-40
Family Transcription factor NusA, N-terminal domain 0.00019
Further Details:      
 
Domain Number 2 Region: 202-280
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 5.69e-29
Family Prokaryotic type KH domain (KH-domain type II) 0.00011
Further Details:      
 
Domain Number 3 Region: 136-201
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 7.17e-17
Family Cold shock DNA-binding domain-like 0.0069
Further Details:      
 
Domain Number 4 Region: 359-418
Classification Level Classification E-value
Superfamily Rad51 N-terminal domain-like 0.00000000000000102
Family NusA extra C-terminal domains 0.0017
Further Details:      
 
Domain Number 5 Region: 281-344
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 0.0000000000000203
Family Prokaryotic type KH domain (KH-domain type II) 0.00048
Further Details:      
 
Domain Number 6 Region: 433-490
Classification Level Classification E-value
Superfamily Rad51 N-terminal domain-like 0.0000000000000518
Family DNA repair protein Rad51, N-terminal domain 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0M1IHF4
Sequence length 491
Comment (tr|A0A0M1IHF4|A0A0M1IHF4_9BURK) Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945} KW=Complete proteome OX=95486 OS=Burkholderia cenocepacia. GN=AS149_10860 OC=Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
Sequence
MSREVLMLVDALAREKNVDKDVVLGALEAALASASKKLFDEGAEIRVHIDRESGEHETFR
RWLVVPDEAGLQEPDREILLFEAREQKPDVEVGEYVEEPVPSIEFGRIGAQAAKQVILQK
VRDAEREQILNDYLERGEKIMTGTVKRLDKGNFIVESGRVEALLRRDQLIPKENLRVGDR
VRAYIAKVDRTARGPQIELSRTAPEFLMKLFEMEVPEIEQGLLEIKAAARDPGVRAKIGV
IAYDKRIDPIGTCVGIRGSRVQAVRNELGGENIDIVLWSEDPAQFVIGALAPAAVQSIVV
DEEKHSMDVVVDENELAVAIGRSGQNVRLAGELTGWQINIMTPDESALKQGEERDRLRAL
FMARLDVDEEVADILIDEGFTSLEEIAYVPLNEMLEIEAFDEDTVHELRNRARDALLTMA
IANEEKVENAALDLKSLDGITPELLAKLAEHGVQTRDDLAELAVDELVDMTGMEEDAAKA
LIMKAREHWFQ
Download sequence
Identical sequences A0A088U3U3 A0A0B2BR36 A0A0G3YP62 A0A0H2XPN7 A0A0M1IHF4 A0A103KZ79 A0A1B4HT15 A0A1I0JCP2 A0A228H3F5 A0A228K997 A0A228PUB4 A0A228RBH4 A2VQT2 U2FDX6 V4ZLK7
gi|107022573|ref|YP_620900.1| WP_006476166.1.100089 WP_006476166.1.100092 WP_006476166.1.100350 WP_006476166.1.101155 WP_006476166.1.101796 WP_006476166.1.11350 WP_006476166.1.11802 WP_006476166.1.11846 WP_006476166.1.12 WP_006476166.1.12271 WP_006476166.1.12663 WP_006476166.1.13970 WP_006476166.1.15352 WP_006476166.1.15603 WP_006476166.1.1597 WP_006476166.1.16354 WP_006476166.1.19333 WP_006476166.1.19536 WP_006476166.1.2050 WP_006476166.1.21535 WP_006476166.1.21687 WP_006476166.1.21859 WP_006476166.1.24953 WP_006476166.1.26867 WP_006476166.1.27092 WP_006476166.1.27194 WP_006476166.1.28019 WP_006476166.1.28022 WP_006476166.1.2894 WP_006476166.1.29546 WP_006476166.1.30037 WP_006476166.1.30330 WP_006476166.1.30456 WP_006476166.1.30633 WP_006476166.1.3256 WP_006476166.1.33258 WP_006476166.1.34550 WP_006476166.1.35154 WP_006476166.1.35296 WP_006476166.1.35537 WP_006476166.1.36191 WP_006476166.1.36737 WP_006476166.1.38091 WP_006476166.1.39604 WP_006476166.1.4031 WP_006476166.1.43430 WP_006476166.1.4378 WP_006476166.1.44577 WP_006476166.1.45366 WP_006476166.1.45543 WP_006476166.1.46435 WP_006476166.1.46450 WP_006476166.1.47400 WP_006476166.1.47938 WP_006476166.1.4904 WP_006476166.1.50542 WP_006476166.1.50701 WP_006476166.1.5101 WP_006476166.1.52041 WP_006476166.1.52590 WP_006476166.1.5376 WP_006476166.1.54490 WP_006476166.1.55141 WP_006476166.1.55715 WP_006476166.1.55843 WP_006476166.1.5618 WP_006476166.1.58165 WP_006476166.1.58201 WP_006476166.1.58908 WP_006476166.1.59087 WP_006476166.1.59525 WP_006476166.1.60115 WP_006476166.1.60848 WP_006476166.1.6105 WP_006476166.1.61297 WP_006476166.1.61392 WP_006476166.1.63689 WP_006476166.1.64260 WP_006476166.1.65117 WP_006476166.1.65992 WP_006476166.1.66449 WP_006476166.1.66838 WP_006476166.1.66976 WP_006476166.1.67717 WP_006476166.1.67801 WP_006476166.1.67828 WP_006476166.1.69107 WP_006476166.1.69846 WP_006476166.1.70842 WP_006476166.1.71022 WP_006476166.1.7129 WP_006476166.1.72000 WP_006476166.1.73115 WP_006476166.1.73381 WP_006476166.1.73511 WP_006476166.1.73998 WP_006476166.1.74171 WP_006476166.1.76085 WP_006476166.1.76362 WP_006476166.1.76719 WP_006476166.1.77508 WP_006476166.1.78666 WP_006476166.1.78903 WP_006476166.1.79860 WP_006476166.1.82445 WP_006476166.1.82881 WP_006476166.1.84218 WP_006476166.1.84349 WP_006476166.1.84940 WP_006476166.1.86351 WP_006476166.1.87087 WP_006476166.1.8783 WP_006476166.1.88043 WP_006476166.1.89001 WP_006476166.1.89220 WP_006476166.1.90044 WP_006476166.1.90247 WP_006476166.1.90652 WP_006476166.1.90674 WP_006476166.1.91654 WP_006476166.1.94348 WP_006476166.1.94474 WP_006476166.1.95150 WP_006476166.1.95564 WP_006476166.1.96101 WP_006476166.1.96507 WP_006476166.1.96618 WP_006476166.1.97923 WP_006476166.1.9804 WP_006476166.1.98478 WP_006476166.1.98796 WP_006476166.1.98955 WP_006476166.1.99173 WP_006476166.1.99354 gi|116689521|ref|YP_835144.1| 331271.Bcen_1019 331272.Bcen2424_1499

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