SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0P0FTX9 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0P0FTX9
Domain Number 1 Region: 212-354,411-509,544-894,977-1021,1067-1151
Classification Level Classification E-value
Superfamily Porins 5.95e-57
Family Ligand-gated protein channel 0.0066
Further Details:      
 
Domain Number 2 Region: 135-215
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 7.46e-16
Family Carboxypeptidase regulatory domain 0.044
Further Details:      
 
Weak hits

Sequence:  A0A0P0FTX9
Domain Number - Region: 960-983
Classification Level Classification E-value
Superfamily Type I dockerin domain 0.0602
Family Type I dockerin domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0P0FTX9
Sequence length 1151
Comment (tr|A0A0P0FTX9|A0A0P0FTX9_BACT4) TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:SEL73498.1} KW=Complete proteome OX=818 OS=Bacteroides thetaiotaomicron. GN=BJP75_018870 OC=Bacteroides.
Sequence
MRNLDIVNMKNSIKGRKSKILKLFLCFLLLGVSYSFANNNNYSQLKTLSVNVNNKTLREV
FQTIEKTSQFVFFYLDDAINLDRKVSIDSKDKKIDEILTELFEGTSCTYRISDRQVFISG
KSAAVSAAQQQNARKITGRVTDTKGEPLIGVNVTVDGDTNGSITNMDGLFELRVSKKNAV
LKFTYIGFKPSEVRINSSTNIYDVVLEEQVNELEETVIVGYGTQRKISNIGAQSSMKLED
IKTPSASLTTTLAGRLAGVVAVQRTGEPGKDAADIWIRGIATPNTATPLILVDGVERAFN
DIDPEDIESLTTLKDASATAVYGVRGANGVIIIKTKPGKIGKPTISADYYESFTRFTKMV
DLTDGVSYMKAANEALRNDGLATKFTDSQIQNTILGKDQYLYPNVDWLNEIFNDWGHNRR
VNVNVRGGSEKVSYYASVSYFNETGMTVTDKSINTFDSKMKYSRYNFTTNLSIDVTPTTK
VEIGAQGYLGEGNYPAISSKDLYNAAMSISPVEYPKMFFINGEAYIPGRSTNNNFNNPYS
QATRRGYDNLTKNQIYSNLRITQDLDMLTKGLKLTAMYAFDVYNEIHVHQDRAESTYYFL
DTNVPYDLDGQPILQRIYTGTNVLSYKQETSGNKKTYLEASLNYDRAFGDHRVSGLFLFN
QQQKLLYPKGTLEDAIPYRMMGIAGRATYSWKDRYFAEFNIGYNGAENFSPKNRYGTFPA
YGVGWVISNEKFWEPLSKVVSFLKIRYTDGKVGNSDVSDRRFMYLNQMKENGDYGYKLGP
NGTKYSGYETLNMAVDLIWEEARKQDLGIDLKLFNDDLSIIFDIFKERRENILLKRENSI
PSFLGYNTSAPYGNIGIVENKGFDATVEYNKRFNKDWTLAIRGNITYNKDKWIEGELPEQ
RYDWMNQYGQNILGKKGYIAEGLFTQAEIDDMARWESLSQANKATTPKPFASQFGTVKAG
DIKYKDLNNDGQIDAYDKTYICRGDVPTMVYGFGFTLGWKNLSLGMMFQGTHDAERIMSG
SSIQPFNGGGGSGNLYSNIDDRWTEDNPNQNAFYPRLSYGAETSSNINNFQPSTWWVRDF
SFLRLKTMQISYNLPKDWVNKVRLKNAAVYVMGTNLFTLSKFKLWDPELNTDNGASYPNT
TSYSVGVNFTF
Download sequence
Identical sequences A0A0P0FTX9 Q8A1Y9
NP_812431.1.73244 WP_011108857.1.19130 WP_011108857.1.24025 WP_011108857.1.29471 WP_011108857.1.59346 WP_011108857.1.81417 WP_011108857.1.83447 WP_011108857.1.97929 gi|29348928|ref|NP_812431.1| 226186.BT_3519

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]