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Domain assignment for A0A0P5PZX0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0P5PZX0
Domain Number 1 Region: 1144-1232
Classification Level Classification E-value
Superfamily BRCT domain 1.12e-18
Family BRCT domain 0.021
Further Details:      
 
Domain Number 2 Region: 211-299
Classification Level Classification E-value
Superfamily BRCT domain 1.57e-18
Family DNA ligase 0.069
Further Details:      
 
Domain Number 3 Region: 900-993
Classification Level Classification E-value
Superfamily BRCT domain 1.45e-16
Family DNA-repair protein XRCC1 0.031
Further Details:      
 
Domain Number 4 Region: 606-707
Classification Level Classification E-value
Superfamily BRCT domain 2.36e-16
Family DNA ligase 0.012
Further Details:      
 
Domain Number 5 Region: 80-195
Classification Level Classification E-value
Superfamily BRCT domain 4.91e-16
Family BRCT domain 0.069
Further Details:      
 
Domain Number 6 Region: 371-462
Classification Level Classification E-value
Superfamily BRCT domain 0.00000000000000196
Family DNA topoisomerase II binding protein 1, TopBP1 0.0013
Further Details:      
 
Domain Number 7 Region: 516-598
Classification Level Classification E-value
Superfamily BRCT domain 0.000000000929
Family DNA topoisomerase II binding protein 1, TopBP1 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0P5PZX0
Sequence length 1438
Comment (tr|A0A0P5PZX0|A0A0P5PZX0_9CRUS) DNA topoisomerase 2-binding protein 1-A {ECO:0000313|EMBL:JAL24016.1} OX=35525 OS=Daphnia magna. GN= OC=Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
Sequence
MSNSEVQEPKMDVENSQFCVNIFCVMPSNSTEATCPKDLFQAHECCKENGFNVNWIQEEA
CMKLKPCKEDVFILSEFVGPLFEFLRHFRCTIIGPQCLLVSVNKGEPLPDVPTPVFTVAM
KGIIVTTTGCSPQEKKDIQEKVQFMGGLYSSAFSVNVTHLIVKSVADFSLKFKVAISRDV
PVMVPNWVDAVWNASIKESVHGTDPMFARYACPPFQGLVICVSQIPIKDREALKKIIEAN
GGRYSGQLEMGKTNILITTSAEGEKYTYARRWKIRCLKPEWIHTSLNKGYAVDPDAFIVE
KSTLPPRCSTPEADHSVMKFGNSSINSTILNESRVQQIDETVGSTTLILNQQCDLRSSEA
LESLDLAISKKAGPFLDGCKVFLSGFDGSPMEKLRRILNNAGVARFNSISESLSHVIVGK
TVEEDWKQLQQLMHKPHIVTVEWVVQSLRLKRAAPEAAYLHPDFKNVIAPNKENAAKKPI
RELSSNLQEDSHMVQQYLTTDHTEEEASSLMDRPQGIFFGLTFQLVNLDTDFVSTMTDLI
VSNGGLVVLKNATYVVTEPVSHTIVPLDQVAKGTLVNTLWIEECVDEGRLVDIEFYHHHI
KVRDRQILAGYTVSFSGIQGRLRELLDDLIGQLGGRPQETFSRKLMEQKNVYRSTHLVCA
KTEGRKYEKALEWGVPAVSAEWVIACATSSSRPNEDDFPPTGEAPKSPEPDVPTPQTAVK
LSVCPTESVVLKTTKQKLAEISSNPTRHLPTHFDMSSPRTPTGPSVTPVMPQPPAAFDSP
MCMQPSSSGTNTVGRTPQPRTTLFNMPTPDTPYGRLLNSDPSPDTRKMWKHALENRVRLT
PRTNESFTTTPQQEIQRGEIIVASEASDYFENLRKKFRLDNGEDGQTTWGSASPAAVPPL
EPPKQPFDGIVVFIHKKIEDQRSELVRAVETLGGKVRFQHCEEVTHFVYQGKLAASKEVK
NAKEWHQKFVSPQWILDCEDATFRPEESQYPPSLNPKMALSLNFNSQPPPPASCTQKRRP
IANIVEMGTPKIPIRKRLTSDIDTHENDHHLEVDEGQNLPVPEVDEEACKELLQLDQVLS
RSAEQIPVVKLANVSAARNGRAPDRVFVPATQPLDMAPDSQSAAVVWDLHETQKITGSEP
APVYRVMFSGMAQDDRDCCTAIIENLGGTVLEANHYDPTCTHLVVAKVGSNEKLLTSIAA
GKWILHPEWLSESEKEHRFLEEQKYEWGNPEASAVHPQVESISEDEAKIATAAYYWRINR
TRGHSDGPFHGITAVLHLREKNASFQRLLEAGGGEVVDPISALEDSRTNLCILDTREVKK
IQLATYASKGIYCVPLIYLRNLVLATDKKLKWSKSVLPEFLPYLLREQGSSNRSVEHNRX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFFFFFFFFFFFFFLVSPILYLSLVH
Download sequence
Identical sequences A0A0P5PZX0

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