SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0P6DQV4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0P6DQV4
Domain Number 1 Region: 428-534
Classification Level Classification E-value
Superfamily Homeodomain-like 9.86e-37
Family SWIRM domain 0.0000687
Further Details:      
 
Domain Number 2 Region: 609-660
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000000000209
Family Homeodomain 0.045
Further Details:      
 
Domain Number 3 Region: 140-193,238-272
Classification Level Classification E-value
Superfamily BRCT domain 0.000000155
Family DNA topoisomerase II binding protein 1, TopBP1 0.05
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0P6DQV4
Sequence length 781
Comment (tr|A0A0P6DQV4|A0A0P6DQV4_9CRUS) SWI/SNF complex subunit SMARCC2 {ECO:0000313|EMBL:JAN16695.1} OX=35525 OS=Daphnia magna. GN= OC=Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
Sequence
MAFAPKKDGGPNLKFYESHETLLLFEGVKTWLLKHCKKYVQTDPPTAKSLSTSITQVIQF
QEDTYGKNVAKPPLTRIPTKCFLDFRPNGGICQILATVYKFRTDHGWRRMDFASPSRMDR
HIEMMMAIEKALIQAKCLVQPNIYIMPEVDKGIVGKLKEIVKRHQGLIAENEAEATHTVY
SATDPLEEEYARPLFRRDRNTLLHWYYFPDSYDKWDTIDLPVDPPELSDYLESLNEPHKT
YRVAANWLLDLDQYNEWMNEEDYEVDVNGKKKVHRLRLSVEDLMMGSENKQKGKTLKRRR
SPSPAGSGSTKAATTPSTAGGAGKRKGVRPSLLGKKFKGGEDDSDDLTRDMEDPPSDTNL
REVEVPKAHPVPGGPLPTTIKKDADWMPTKGAALTDLDEEGEKLADITLVTPQDDPHGQQ
HDDNVTDQTHHIIIPSYAAWFDYNSIHSIERRALPEFFNGKNRSKTPEVYLAYRNFMIDT
YRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLVNYQVDGDSRPMPVGPPPTSHFH
ILSDTPSGLQPVNPPRTTQPSAAKTLIDMDKKTGGAARQSETAPVANNFGLKLDQYSRKS
SSVLKNKATREWTEQETLLLLEGLELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPFF
EDVELGSGGALGPLAYQPVPFSQAGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAKIKD
EVPSALLETHMKNVEHAVNEGKADPTVAALTQSGIAGTVQDKGLGKSRKRERKGESRKIS
R
Download sequence
Identical sequences A0A0P6DQV4

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]