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Domain assignment for A0A0P9KHL8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0P9KHL8
Domain Number 1 Region: 9-326
Classification Level Classification E-value
Superfamily Tex N-terminal region-like 4.71e-119
Family Tex N-terminal region-like 0.000000000135
Further Details:      
 
Domain Number 2 Region: 327-475
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.52e-54
Family Tex RuvX-like domain-like 0.000000282
Further Details:      
 
Domain Number 3 Region: 476-562
Classification Level Classification E-value
Superfamily RuvA domain 2-like 1.11e-26
Family Tex HhH-containing domain-like 0.0000258
Further Details:      
 
Domain Number 4 Region: 644-731
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 6.19e-25
Family Cold shock DNA-binding domain-like 0.0000166
Further Details:      
 
Domain Number 5 Region: 566-638
Classification Level Classification E-value
Superfamily RuvA domain 2-like 2.89e-20
Family Tex HhH-containing domain-like 0.0000212
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0P9KHL8
Sequence length 781
Comment (tr|A0A0P9KHL8|A0A0P9KHL8_PSECA) S1 RNA-binding domain-containing protein {ECO:0000313|EMBL:KPW64637.1} KW=Complete proteome OX=86840 OS=Pseudomonas cannabina. GN=ALO81_05259 OC=Pseudomonadaceae; Pseudomonas.
Sequence
MLTTPGGLMDSINSRIAEELGVRPQQVAAAVALLDEGSTVPFISRYRKEVTGSLDDTQLR
HLEERLRYLRELDDRRVSILASIEEQGKLTPELARDINLADTKTRLEDLYLPYKQKRRTK
GQIALEAGLGELADGLFSDPGLNPETEATRFVDAEKGVADVKAALEGAKYILMERFAEDA
ALLDKLRSFLKQEAVISARVVPGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGF
LSSALKVGEELPGAMHPCELMIGERFGIQNQSRPADKWRAEVVRWTWKVKLYSHLETDLL
GELRESAETEAINVFAHNLHDLLLAAPAGQRATLGLDPGLRTGCKVAVVDATGKLLDYAT
VYPHVPKNQWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLIKKYPGLKMTKVM
VSEAGASVYSASELAAKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV
SQLKLARGLDAVVEDCVNAVGVDVNTASVALLARISGLNTTLAQNIVAHRDENGAFKTRA
SLKKVSRLGEKTFEQAAGFLRVMNGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDA
SFLKRLDPKKFTDETFGLPTVTDILQELEKPGRDPRPEFKTAEFQDGVEDLKDLQLGMIL
EGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKR
VGLSMRMSDTPGEKIDGARGARPGSSQRQQSSAPRKETSAPAPANNAMASLFANAKQLKK
R
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Identical sequences A0A0P9KHL8

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