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Domain assignment for A0A0R1RLP8 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0R1RLP8
Domain Number 1 Region: 15-316
Classification Level Classification E-value
Superfamily Tex N-terminal region-like 2.75e-104
Family Tex N-terminal region-like 0.00000387
Further Details:      
 
Domain Number 2 Region: 317-466
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.37e-46
Family Tex RuvX-like domain-like 0.0000201
Further Details:      
 
Domain Number 3 Region: 467-553
Classification Level Classification E-value
Superfamily RuvA domain 2-like 7.56e-25
Family Tex HhH-containing domain-like 0.0004
Further Details:      
 
Domain Number 4 Region: 636-719
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 6.04e-22
Family Cold shock DNA-binding domain-like 0.00025
Further Details:      
 
Domain Number 5 Region: 558-631
Classification Level Classification E-value
Superfamily RuvA domain 2-like 0.000000000000218
Family Tex HhH-containing domain-like 0.038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0R1RLP8
Sequence length 724
Comment (tr|A0A0R1RLP8|A0A0R1RLP8_9LACO) Transcription accessory protein [S1 RNA binding domain] {ECO:0000313|EMBL:CUS26782.1} KW=Complete proteome; Reference proteome OX=1423778 OS=Lactobacillus oligofermentans DSM 15707 = LMG 22743. GN=FC70_GL000237 OC=Lactobacillus.
Sequence
MEEQTVQLVKNNLQGISGKQVNTVLKLMDEGNTVPFIARYRKEMTGSLDEVQIQDIETEY
KRVTTLQDRKTAVVKSIAEQGKLTDVLEKKIQSSEKIQDVEDLYLPYKQKRQTKAMIAKK
RGLEPLANWILSFPAGDLTQRAQQYVSDEQELPDVQAVFDGAHEILAEAFSEVAIIRNWV
RNHTINSGTVETTVKTKGKELDEMGVYQQYYAFEEPIKRMSSTRTMAVNRGEKEKVLTVK
VKVDTEPIMNFFRFRLIGKHDESAATSFVETAYQDAYKRFVGPAIEREVRNSLTEDAQEQ
SIKVFGQNLYNLLMQAPIKGKVVLGFDPAYRTGCKLAVIDENGKFLEKAVIYPHKPAPTA
KQQAAQQEFVNLLEKYQVEMIAIGNGTASRESELFVAEAITKVKHPVYYVIVNEAGASVY
SASQEARDEFPDLHVEQRSAISIGRRLQDPLAELVKINPESVGVGQYQHDLPAKDLDSEL
DVVVERAVNRVGVNLNTASYQLLTHISGLSKTIAENIVKYRDENGRYNSRTELKKVPRLG
PKAFEQSVGFLRIIGGKTALDNTDIHPESYATAKKVLVAAGVKTTELGNETAIEKIKQVD
LKQLQSTESVGEATLSDIFNSLQNPGRDLRDSMPAPLLRKDVLTMDDLSEGMKLEGTVRN
VIDFGAFVDIGVKHDGLVHVSKLTKKFVSDPKQVVSVGDIVEVWIDSVDLARQRIQLTMI
DPKG
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Identical sequences A0A0R1RLP8
WP_057889195.1.75322

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