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Domain assignment for A0A0R2SHX0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0R2SHX0
Domain Number 1 Region: 1-129
Classification Level Classification E-value
Superfamily Transcription factor NusA, N-terminal domain 2.88e-35
Family Transcription factor NusA, N-terminal domain 0.00016
Further Details:      
 
Domain Number 2 Region: 203-281
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 4.01e-28
Family Prokaryotic type KH domain (KH-domain type II) 0.00017
Further Details:      
 
Domain Number 3 Region: 134-202
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 2.73e-19
Family Cold shock DNA-binding domain-like 0.0097
Further Details:      
 
Domain Number 4 Region: 357-420
Classification Level Classification E-value
Superfamily Rad51 N-terminal domain-like 7.38e-17
Family NusA extra C-terminal domains 0.0017
Further Details:      
 
Domain Number 5 Region: 282-346
Classification Level Classification E-value
Superfamily Prokaryotic type KH domain (KH-domain type II) 0.0000000000000085
Family Prokaryotic type KH domain (KH-domain type II) 0.00062
Further Details:      
 
Domain Number 6 Region: 432-493
Classification Level Classification E-value
Superfamily Rad51 N-terminal domain-like 0.0000000000000235
Family DNA repair protein Rad51, N-terminal domain 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0R2SHX0
Sequence length 494
Comment (tr|A0A0R2SHX0|A0A0R2SHX0_9GAMM) Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945} KW=Complete proteome OX=1655577 OS=OM182 bacterium BACL3 MAG-120507-bin80. GN=ABR69_05050 OC=Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM182 clade.
Sequence
MSKEILMVVDAVSNEKGVSREVIFEAIESALAMATRKLNEEEEIDCRVAVDRKTGEYETF
RIWTVVADDEYVNEFTQYMLEQVQERDAALEVGSKIEEKIDNVPFGRIAAQTAKQVIVQK
VRDAEREIVLNEYKDKIGELVTGTVKKVTRESIIVDLGGNAEAILMRDQMIPRENFRMSD
RIRALLIDVRPEQRGPQLFLSRTSPQMLIELFKIEVPEINEQIISIRAAARDPGSRAKIV
VSTNDGRIDPVGACVGMRGSRVQVVSGELSNERIDIILWDDNPAQLVINAMSPAEVASII
MDEDSNTMDVAVEEDNLAQAIGRNGQNVRLSAELTGWTINVMSEEEAAEKQEKESVGLID
MFMAKLDVDDETAEVLVSEGFTSLEEIAYVPMEEILSIDGFDEEIAEELRNRAKDALLTQ
AIASEEDLSSMNVADDLMNMEGMDKELALELAKRSILCMEDLAEQATDELMEIEGMTEER
AGQLIMTARAPWFE
Download sequence
Identical sequences A0A0R2SHX0 A0A0R2TD38 A0A0R2TFL7 A0A0R2X7Z7 A0A0R2XQQ3

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