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Domain assignment for A0A0V0QMM0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0V0QMM0
Domain Number 1 Region: 110-304,362-463
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.05e-75
Family WD40-repeat 0.000000421
Further Details:      
 
Domain Number 2 Region: 2-78
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 8.37e-16
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.00037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0V0QMM0
Sequence length 464
Comment (tr|A0A0V0QMM0|A0A0V0QMM0_PSEPJ) WD40-repeat-containing domain {ECO:0000313|EMBL:KRX03372.1} KW=Complete proteome; Reference proteome OX=266149 OS=Pseudocohnilembus persalinus (Ciliate). GN=PPERSA_12651 OC=Pseudocohnilembus.
Sequence
MVLTQKQRDELNKGILEYLFNNNYEEAGEKFEELLGYKYDAGQQKNPMMKNILEKKWVSI
IRLQKRDMELKQEIEQLKEDIEDLKKRGALGGAQGMQGGLLDKADKSLMYNPKQKHVLSS
HRANITRVAFHAAYSWVASSSEDGSAKIWDSETGELEATLKQHAGVVNSVAFDYSGQYLV
TASSDMTLKIWDLQKNFICVKTLQGHDHSVSHGEFSLDNNFVLSCSRDKTIKLWEVNSGY
CKKTLDAHTEWVRMVKISPNGQKFASCSNDQSIIIWNYTNMEAQHQIQDAHDNVIEILAW
CGHNLDKSDLIMKKGGSQNGNQQHSNSQNNNNNGNEESKSEHSEKQLNQQNQQQQNEWNS
IFLASGGRDKLVKLWNTVSGELIHTFQGNDNWVRGIGFHPFLTFMYTSSDDKSIRVWNLM
TGKQVRKIAEAHTHFISSLDTSKNYPLVASGGFDFKVKIWDLKP
Download sequence
Identical sequences A0A0V0QMM0

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