SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0V0RU10 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0V0RU10
Domain Number 1 Region: 993-1228
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 2.86e-44
Family Eukaryotic proteases 0.00068
Further Details:      
 
Domain Number 2 Region: 243-330
Classification Level Classification E-value
Superfamily Frizzled cysteine-rich domain 4.05e-16
Family Frizzled cysteine-rich domain 0.0019
Further Details:      
 
Domain Number 3 Region: 534-572
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000694
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 4 Region: 462-498
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000223
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 5 Region: 711-750
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000458
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 6 Region: 389-426
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000102
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 7 Region: 572-605
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000113
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 8 Region: 834-869
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000785
Family LDL receptor-like module 0.0031
Further Details:      
 
Domain Number 9 Region: 424-462
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000126
Family LDL receptor-like module 0.0018
Further Details:      
 
Domain Number 10 Region: 611-643
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000209
Family LDL receptor-like module 0.0023
Further Details:      
 
Domain Number 11 Region: 755-793
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000511
Family LDL receptor-like module 0.0029
Further Details:      
 
Domain Number 12 Region: 1240-1273
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000126
Family LDL receptor-like module 0.0035
Further Details:      
 
Domain Number 13 Region: 664-697
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000144
Family LDL receptor-like module 0.0022
Further Details:      
 
Domain Number 14 Region: 348-389
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000772
Family LDL receptor-like module 0.0021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) A0A0V0RU10
Sequence length 1277
Comment (tr|A0A0V0RU10|A0A0V0RU10_9BILA) Low-density lipoprotein receptor-related protein 1B {ECO:0000313|EMBL:KRX17958.1} KW=Complete proteome; Reference proteome OX=6336 OS=Trichinella nelsoni. GN=T07_2222 OC=Trichinellida; Trichinellidae; Trichinella.
Sequence
MEAGVPGKYSQRGETDRRTSRGMKITHPTSLEHHEQRHVNRIQLNNENEHNRRFRGNLYK
FGCIISICVVFILVIVLSALLSSEGNSSSAEQLTENMKRKFWCTFIQENSLEESTKMELE
LSTLLYLEMCKAEISFFANSIRSSFFFFICRDNLNGVNVTFILEFINEPSLEELNVDFLK
TLFQTTIPRINVESVQVEEMKQPIIPVPTPESNSTEPTINTNTTIPSTPNQTTPSVITLF
DLVPFCTDFGWQKTCYPNHLGYRNKYEVLASLSFFQILNKQQCHRQVQIFACLLLQPPCK
ENTGIVSVCRPFCEEVVSACSKSLAMTEIGEKNLCSDEISNYGPNCMQFCDEDNFICEQT
RLCINSTRRCDGNLDCGANDISDELNCECKSNEFRCRNGLCISQLKTCNNENDCGEWEDE
KNCTCRENWKKCTETGQCFPASFWCDGEFHCGDKSDELQCECPREQFICQNGACMPANVR
CNGVNDCGDFSDEFDCECQAEQFRCDKYLCKYFDNDWCNGKADCVDATDEPANCTCKPGQ
FKCDDGFCLAKHRVCDRYIDCKDGSDELHCDCTPEEFQCEPGICIPLEKVCDGEANCANR
KDELQQCECNSKEQFRCKNGQCMDINRYCNHRTDCLDGDDEFQNCEGKCPPGYGKKCNLR
TTGEYKCLPESMICDGVSDCERNEDEENCRIIIFLINQTCRKLNFNHASIFTECREDQFQ
CNDGACKPWSLYCNSIHDCLDFSDETNCTCNEKYQETCHDGWCYDKNHRCDGKAQCADLS
DEYNCTHKYTYCNLACAEYLRKSNPEKLCDYVQDCADRTDELNCSYIPNNLKNKYDTFLC
YGGAALDRSKICDGNIDCPMGDDEYHCYFLMPKEGYDLNKPWVFQDAGVIFVQSKGSWGI
VCAPSNENNNSLNALAEHVCKRNLFHSVDYISRVPLDDTQQIPTYQLNSFNPKDFVQTDC
PSKQTVAVMCKSEICGQDPYKLSSPSVSLLQSTAMRTLPFFASIYTDGKHRCSGIIYQRR
WILTSASCVEKCLILFDLNDLFTMRVRVGQQRNSSLSPFDQFFYVAQAIKHSMYKPIPNV
EHDIALLQLDKNIQYTPFVQPICLSNGKVDVSKLDTHTIGMGRLRRKAIKAEHADLTRLS
VKNADICKSNLIVRLERVKIAENQFCTLERDKSYLCQGETGSPILTQYSNGTWAVVGLTT
DVNYCFKKKFPSIFTDLSHYSEWIQYITDYASKQKERKIVHCEGSFSCLLGNCIESTSVC
DGVRDCAFGEDEICSYP
Download sequence
Identical sequences A0A0V0RU10

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]