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Domain assignment for A0A0V1IKV0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A0V1IKV0
Domain Number 1 Region: 1949-2192
Classification Level Classification E-value
Superfamily Rap/Ran-GAP 3.53e-59
Family Rap/Ran-GAP 0.00024
Further Details:      
 
Domain Number 2 Region: 332-437
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 3.76e-24
Family Canonical RBD 0.00083
Further Details:      
 
Domain Number 3 Region: 211-323
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 4.99e-23
Family Canonical RBD 0.0054
Further Details:      
 
Domain Number 4 Region: 652-1247
Classification Level Classification E-value
Superfamily ARM repeat 0.0000000201
Family Armadillo repeat 0.063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A0V1IKV0
Sequence length 2202
Comment (tr|A0A0V1IKV0|A0A0V1IKV0_TRIPS) Heterogeneous nuclear ribonucleoprotein Q {ECO:0000313|EMBL:KRZ23281.1} KW=Complete proteome OX=6337 OS=Trichinella pseudospiralis (Parasitic roundworm). GN=T4B_15140 OC=Trichinellida; Trichinellidae; Trichinella.
Sequence
MCDVEMESDGFGEETLDTSEICDPFGGKNEEDATEYKPSVKCEEDTIECEESHISVLEDT
GNGEFETGLPGNEDDIVASLTKKGLNEKVAEAMTKLICNGVVMLEDVDDRILEIISSMRV
EQALCVIQKFKEVDLLGVSCTAAYLGSLMKTFRDRVKIYGLQEAMKQPLMDGPDREVLNS
IIARTGYPTEVTIGQRKYGGPPPDYEGSPPGPGCEIYIGKIPKGIFEDTLIPLFEQCGKI
YDIRVMMDPLSGTNKGYAFVTYCDKSSATEAAKKNITDVIMYSNPNDPVNKKNRGFCFLE
FADHKSASQAKRRLGSSRFRPWMMELVVEWAETQDDVKILYLRPLKDSVSEEELRVKFSQ
YGTVERVKRIKDYAFVHFAEREQAEKAIEAMKGQEFDGVPCEVSFAKPTDRKRKDVRIGS
SGVGIGGGGVGGGSGTGSIGAGIGPGGRTNNGVDSRRLDSFGNYSRANLSRGGGGPPMQY
HSPWIQGPPPNFGYPAALGPPFGAGYFGGFAAGAGIQQHPGMLTARDCRFLGNVAFGQGG
PFGAVNQSPFANAVGGASRAPPSGGGRSLGMNKRRHLGGGTAGTAKRDRPIGGTAVQAIV
VESENTDMGSKECLKDKLAKLFHLKSPVEDESTGPQSPEPDHALCVAIAKQLTESKDAND
LVAVLQELIAVVEETRLSPEIVELLWTRVSQLISDECTLDEHRLTALEFLTTLTKVQYET
LDKLRTSICLLLINPRKLKCDALPLLHLLHSLTKDGRDIRGLENQLGELIVQYMEFIPPS
SASSFAFLELLQAVVNHHADTLDEKHLCNVLTYVCLVTHDVNSAVVKIICALNIVDLVRA
NAHMPSDCLAFVVHSLCKLVPRDDVFLYVWRTMQGLLNSSVGDAVIWHFCQIMQHIALGT
GYIDMTLLQMARCVSSFPSTSSSLQDVGARDPSIIRSAVICASRALWGQKRAEAVTVLPE
AVLPAMRLALSCGEVAVVVEVISSVRTLVEKHGANLNSLSWFSILHLLTTVHEWIGSCDQ
CQAVDSQHRSLVIDHFCSTVDFVQQLISQHLFSGSLETFYTLVEQGASLLDQNVVTMMLR
YKAKAFSSLTTDFLGTVSKVMQMFFFDDNRTTVRVCAIKIFQELFAQYSELYPYLTMQPI
ASALISSVLNEQDHSVIGSVLELMLAMAVATAEDEIYFFEVMDIAQKFITDYLVTASSEP
LPSEDELAKFAGNVQLVLNGLVNVLKLKFQTFYGSMVQRVLKLIIDTLIFQYERGICRVF
LGDCRKMMLQFLLSLRCDSSCRCLAYLHERRVTPMANAFVLVDQCWERTVGEKANGHDKS
QEQNSNAQRVTTAVDGNDSNLIVHFSINELWQLVLKAIRKERYWPALKQVFVSLKYLLHD
RYFIQGWQGEENKQKQNNTIDKDDDDQGNGKEKVDDDCDYDDDADGGGNVRALCVELLRL
IANPRRSEQMLPSPKESGFDSADMNEFLYPILAELVSYKHILSKQNLNGIAMATQGGIKS
PKSTQAVIATTYCMLLIPDVMKPMMCSLISQLADLPYTPTLAIAVLELLDQLVLSPNLYS
NFTAKHYLLLFTILSVCMNPFRFTCFIVARSFRSILRWYSVISADIRELISKSVLEQLDL
SIAAEKGNVNEDLKTLNKELRAVCSEYFTYESFLGEMTAFDEPDTHYHRLRSASWYSDGR
IVTVSSLISKEVFYKRCIEASPPVRELAELRLQTTSSSGQSCKATGEKDADDEEPALFKR
LHSIGAKLKEAKSTFPVRTRSKDDSFIRSNFGKSYKTNSNRKLCKKHNSSTTDTTGSDTT
NTNSNSNNTSNASSLSSTPRKLKNDRRVRHASALSTVGWDWIEQMEKQQKSSCFELIIRT
AVMKKRWLFVPKVVGQDMNSAIVLLLRDAVAQSRQTLNSIKNSTKNEADDRADDDSASNR
FEMLLKDVSPAGGGRLLGDGLLLGLLRITNDGGSCWPLANDSAINLALKMFDLIAKFETY
KIGVVYVGIDQCSETEILANEHGSERYHRFLSRLGEMVPLDENSRLRWYLGGLDIGGRDG
QFTYVWSQANEQVVFHVATLMPTMLAQDPQCTGKKLHIGNDFVTIVYNDSDMEYKIDTIS
GQLSAVVIVVRPIDQHTLLITLTAKDEIVKWLALKQVQVSDELAPMLCRQMAIRAELSAR
IWLAQRNCGKALDSNIMERHRQINRIKDKFSTERFCWTDIFQ
Download sequence
Identical sequences A0A0V1IKV0

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