SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A0V2DFE0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A0V2DFE0
Domain Number 1 Region: 130-562
Classification Level Classification E-value
Superfamily PLP-dependent transferases 7.76e-99
Family Ornithine decarboxylase major domain 0.00000129
Further Details:      
 
Domain Number 2 Region: 567-707
Classification Level Classification E-value
Superfamily Ornithine decarboxylase C-terminal domain 1.83e-43
Family Ornithine decarboxylase C-terminal domain 0.00028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A0V2DFE0
Sequence length 713
Comment (tr|A0A0V2DFE0|A0A0V2DFE0_SALCE) Lysine decarboxylase LdcC {ECO:0000313|EMBL:KSB66687.1} KW=Complete proteome OX=1243604 OS=Salmonella enterica subsp. salamae serovar 56:z10:e,n,x str. 1369-73. GN=LFZ48_06680 OC=Enterobacteriaceae; Salmonella.
Sequence
MNIIAIMGPHGVYYKDEPIKELERALQSLGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSEINQLNEYLPLYAFINTNSTLDVSVHDMRMALWFFEYALGQAEDIATRIHQY
TNEYLDNITPPFTKALFTYAKEGKYTFCTPGHMAGTAYQKSPPGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPQREFTHDSIARKVEETAQAQWPVH
AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGDRVPGKVIF
ETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASIETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDSWFFDIWQPEEVDEAKCWPVTPGETWHGFTDAD
DDHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGVVVEKIGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQH
DLPGLMLRAFEVLPEMIMTPHQAWQRQIKGEVETVALDQLPGRVSANMILPYPPGVPLLM
PGERITQQSRAVLDFLLMLCSIGQHYPGFETDIHGAKRNEDGVYQVRVLKHAC
Download sequence
Identical sequences A0A0V2DFE0
WP_058114327.1.94921

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]