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Domain assignment for A0A131YWU6 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A131YWU6
Domain Number 1 Region: 169-283
Classification Level Classification E-value
Superfamily SEA domain 0.000000000000235
Family SEA domain 0.0053
Further Details:      
 
Domain Number 2 Region: 598-634
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000196
Family LDL receptor-like module 0.002
Further Details:      
 
Domain Number 3 Region: 559-592
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000654
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 4 Region: 485-521
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000072
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 5 Region: 521-557
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000942
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 6 Region: 300-363
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000034
Family TSP-1 type 1 repeat 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) A0A131YWU6
Sequence length 678
Comment (tr|A0A131YWU6|A0A131YWU6_RHIAP) Low density lipoprotein receptor {ECO:0000313|EMBL:JAP82975.1} OX=34631 OS=Rhipicephalus appendiculatus (Brown ear tick). GN= OC=Rhipicephalus; Rhipicephalus.
Sequence
MPKERTEDKRAMAKMCDWMYVTDPRFMGRNGPTTVRLDIMQQDKQRTSCQQIPLLKVRVD
KAGFTSEADLKPPLPGGHPHHEPGSPRSAVACSSSSAKLKKRPLCRFWKLRFPSSSSSRS
RLVALLVGIATLVLVAVVASLVYTLYTRSKVDVRKEEIRQDPEAGSWAVEVTFRVTNRNY
SPDLVDHSSRVFKSLASEVARALDELFYLGPLSQDYNMTQVIEFSASDSSSIGVNCRIVL
NQPLSNAAHHVGLAFIQVLEQGHGILPAGNLRVDIRSLHFTNVKPGAVPPPVMVTHGPSY
FDAAWSPWSPWSDCTGHDGQCNPNRLRSRRRECRSHYGRGSLLPDNLACLEQGGKEVEFK
SCLCPTRAPPPTTTTDAATSEDGDDDGDEGDSETENATAAPPSTTREKATADTASQPSMP
DDWRPCHQCQPGEICFMNGEETKPHCVMPKDPNDPRGCGGWCSGPNELCQKLDNNTVHCV
DDSECLHDEWRCKNGLCIPEQRRCDGHFNCYDMTDEYNCECGSDGFHCSNNTSCLPLDRR
CNGFVDCWDGSDEANCTALCPASQHTCNSGQCIPMDNFCDSYRDCDDGSDEPPGCDSPCL
AHQRQCQNGRCVPGTVWCDGFDSCGDGSDEANCGSAAPSRDRSSVVPALPPGHLLGRLLS
NKHRKAVHPQTPVARSRR
Download sequence
Identical sequences A0A131YWU6

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