SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A146PQU2 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A146PQU2
Domain Number 1 Region: 125-368
Classification Level Classification E-value
Superfamily vWA-like 9.3e-68
Family Integrin A (or I) domain 0.00000179
Further Details:      
 
Domain Number 2 Region: 625-711
Classification Level Classification E-value
Superfamily Integrin beta tail domain 1.31e-17
Family Integrin beta tail domain 0.0031
Further Details:      
 
Domain Number 3 Region: 998-1116
Classification Level Classification E-value
Superfamily CalX-like 0.00000000000000275
Family CalX-beta domain 0.0024
Further Details:      
 
Domain Number 4 Region: 1118-1221
Classification Level Classification E-value
Superfamily CalX-like 0.000000000000602
Family CalX-beta domain 0.012
Further Details:      
 
Domain Number 5 Region: 27-76
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000141
Family Plexin repeat 0.0015
Further Details:      
 
Domain Number 6 Region: 540-577
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000237
Family Integrin beta EGF-like domains 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A146PQU2
Sequence length 1297
Comment (tr|A0A146PQU2|A0A146PQU2_FUNHE) Integrin beta {ECO:0000256|RuleBase:RU000633} OX=8078 OS=Fundulus heteroclitus (Killifish) (Mummichog). GN= OC=Fundulus.
Sequence
MGSWSIRCLAGLGLLAVLLTYCSAQVHYCLASKSGSCSECLQAGEGCAYCSEETFSGPRC
DLHEKIVAQGCSAAAVITAKSSLLIEKEEKINKKIQKAQASPQEATMTFLPGETKEINVQ
VFAPTKGPLDLYILMDFSNSMKDDLDNLKKMGNELAVVVKTLSDDYTIGFGKFVDKVIEP
QTDMRPSKRKQPWPDSDSPFAFQNVIKLTSDVDSFIKELQKERISGNLDAPEGGFDAILQ
AAVCKNEIGWRTHSTHLLVFSTESAFHYEADGVNVLAGILPRNDELCHLDGEGKYTEATN
QDYPSIPTLVRLLGEHNIIPIFAVTNHSYTHYSKLKEYFPIAEVGLLQEDSSNILQVMED
AFQSIRSKMSIRAENRPKAFDAHFLHLNNKVAEYGAFNFQPGEVGEFKVKLKAQRMIEET
HVCNMNPDDTEGMIKVKPTTFGVGVNVKASILCPTCDCEKTGIPKAERCHGNGKLVCGKC
QCDDGWLGTFCNCSKTSDLNKDQCIGPNMTKPCSGRGDCQACGSCVCHNPEQFEGPYCQY
DKTQCPRFSGILCNDRGSCVMGRCACSEGWEGAACECSKSNDTCLDTKGNICGGRGECKC
GSCKCPDSEIEMTSTCEPNFQFQLGACEVTRSCVQCQAWKTGEKKNKEECDQCPFKIVMV
DKLKERKDVLDSCSFRDEDDDCSYQYTVETSKDITNNELLVEVLKDRECPPASLLWLLPL
LLFLLLLLALLLLCCWKYCACCKSCWQSCLALLPCCRRGRMVGFKEDEYLLRQSQLTSNH
LDTPMVRTGPPKGTDVVRWKVTDNVHRAPNHPQALIKPNPDEWIQFPISLRLNRLFSENL
YRLDSRDAEQLRKEVSENLNEVYKQIPKAEKVQKIEFRKQENAGKRDDYTIMDTVLSAPR
RAYPDIVKLTEKNVQSGNFGDLKVVPGYYTVATDREAAGAVEFQEDVKSVDVHVPLFVKD
DDDDKKQLLVEARDVPLGIAEIAKRFVNITIIKEHATSIFSFLQPKYTYSRQDGVANIPI
SREIIEDGRTQVTYSTQDLTAKNKKDYVAMQGDLSYGPGETQKLVPVRLLELSEKDGFIE
DKQVKQFAMDLSNPRQGAKLGRYPRTVVTITDLPEPSVMMFKNSTQNFSTFDPTYNIPVV
RSRNEDTPATVHWRTVKSQRLDLSGPLKFAPGETEKYIVIDPKAHPGPVQPETFQLELFD
PSANAAVGERKNTIINVRDEPRSPEFSQTQMKGYSXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Download sequence
Identical sequences A0A146PQU2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]