SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A0A146WDU0 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A0A146WDU0
Domain Number 1 Region: 62-513
Classification Level Classification E-value
Superfamily Sema domain 1.7e-141
Family Sema domain 0.0000000906
Further Details:      
 
Domain Number 2 Region: 862-914
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000000157
Family TSP-1 type 1 repeat 0.00035
Further Details:      
 
Domain Number 3 Region: 619-669
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000000017
Family TSP-1 type 1 repeat 0.00028
Further Details:      
 
Domain Number 4 Region: 808-860
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000157
Family TSP-1 type 1 repeat 0.0014
Further Details:      
 
Domain Number 5 Region: 509-559
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000244
Family Plexin repeat 0.0042
Further Details:      
 
Domain Number 6 Region: 674-725
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000235
Family TSP-1 type 1 repeat 0.00094
Further Details:      
 
Domain Number 7 Region: 918-962
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000126
Family TSP-1 type 1 repeat 0.0014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A146WDU0
Sequence length 1106
Comment (tr|A0A146WDU0|A0A146WDU0_FUNHE) Semaphorin-5B {ECO:0000313|EMBL:JAR28251.1} OX=8078 OS=Fundulus heteroclitus (Killifish) (Mummichog). GN= OC=Fundulus.
Sequence
MTASSQDSNPSFLAGLFLLLLLLLFPAVYTQNSAVPTTPSTPLFDPLTQPECTKKEHPKV
SIQALSPWISTFFHPGVRDYSQLTLDLTRDELIVGARNYLFRLDLRNLSLIQATEWAPDE
ETRKSCQSKGKTEMECQNYIRVLLVNKTEVMTCGTNAFQPLCITREVGNISRVLERVNGV
ARCPYDPRHNSTAVVTESGELYAATVIDFSGRDPVIYRSLGGMPPLRTAQYNSKWLNEPH
FISAYDIGLFTFFFLRENAVEHDCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKARLNC
SRSGEIPFYYNELQSTFYLPEQDLIYGIFTTNVNSIAASAVCAFNLSAITQAFNGPFRSQ
ENPRSTWLPTANPIHNFQCGTINDKGPNEGLTERSLQDAQRLYLMNDVVQPESVDPLVMQ
DDVRFSNLVVDIVQGMDTLYHVMYISTEYGTILKALATPNKNLQGCYLEEMELHPSGVRE
PILSLQILHSDRSLFVGLKDKVLKIPLERCSSYKTETLCLEARDPYCGWDFRQRKCTTLE
ESSNMSQWKQNITVCPLRNQTTDGGFGPWTPWHTCNNDDPLDGVSSCLCRSRSCDSPAPR
CGGKNCEGPSIEVSNCSRNGGWTPWSSWGQCSTTCGTGFEMRQRSCNNPSPRHGGRVCVG
PTRDERFCNEGVSCPQPIFWTPWGSWTKCSTECGGGVHSRVRSCENGNTCPGCALEYKAC
NLEACPEVKRNTPWTPWMPVNVTQGGARQEQRMRYMCRAHLADPHELQIGRRKVETRFCP
NDGTVVCETDSLVEELLKTPVLRMAVTSWSSWETWSSCSQSCAKGYRTRRRTCSGPEGKS
APVACRGSPVEYQDCNVQACPVKGAWSCWSPWSQCSVGCGGGHYQRTRSCNSPTPANGGD
ICIGLHTEEALCNTHTCDGGWMAWSLWSTCDDSGFQTRSRVCGAQGSSPCLGNSTQRRDC
NEIPVILPASGFDKDQQCGAFTSIHLIATGVSCFLGAGLLSFLIYVYCQRFHKPSQESAV
IHPTTPNHLNYKGNTTPKNEKYTPMEFKTLNKNNLLPDERSNFYPTPLQQTNVYTTTYYP
TPLGKFDYQPNASPSPCRTYNNSNNS
Download sequence
Identical sequences A0A146WDU0
XP_012723986.1.37407

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]