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Domain assignment for A0A146YUM7 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  A0A146YUM7
Domain Number 1 Region: 55-317
Classification Level Classification E-value
Superfamily Sema domain 5.62e-87
Family Sema domain 0.000000392
Further Details:      
 
Domain Number 2 Region: 386-446
Classification Level Classification E-value
Superfamily Translation proteins SH3-like domain 1.54e-20
Family SPT5 KOW domain-like 0.000097
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A0A146YUM7
Sequence length 1006
Comment (tr|A0A146YUM7|A0A146YUM7_FUNHE) Transcription elongation factor SPT5 {ECO:0000313|EMBL:JAR57824.1} OX=8078 OS=Fundulus heteroclitus (Killifish) (Mummichog). GN= OC=Fundulus.
Sequence
MGSQKSVQPLLLLLLILMLLNSLSQLWAFPFSPSLDLDVTPRTTIFYKGMLGSNGFTGSS
QNYSTLLLEEEAGRLYVGGRGALYALNTSNISTSADLAIDWNVTPEQKKQCLNKGRNNQT
ECYNHIRFLQRYNETHLYVCGTNAFRPLCAYIDTERFNFSSGFEEGRDRCPYDPAKGFTG
LLIDGEMFTASQYEFRSSPDIRRNFPFPTLRTEEAPTRWLLEADFVGSVLLKESINSSIG
DDDKIYFFFTERSQEQIAYPSQTKVSRVARVCKNDWGGQRTLQRKWTTFLKARMVCSVPE
YELHLNILRDVYVLQARXXXXXXXXXXXXXXXXXXXGKEREHNLQAGDNVEVCEGELINL
QGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVKVIAGRYEGDTGLIVRVE
DNFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERE
TFQVLNMHGKVLTVRHQAVNRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRH
LFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGGFAPMSPRISSPMHHG
GGGAQQRGGGGGGGGFGRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHS
TCQTISVDRQRLTTMGAKRHTGSTSAHGRTPMFGSQTPMYGAGSRTPIYGSQTPMHDGNR
TPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSRNDEEYDFGFDDEPSPSPQGYGGTPNPQ
TPGYPEVPSPQVNPQYNPQTPGTPAMYNPEQYSPYAAPSPQGSYQPSPSPQSYHQVAPSP
VGFQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSNIEQGSGD
WVTTDILVRVKDSFMDLMGQIGVIRSVTGGMCSVFMQESEKVVSVSSDHLEPVTPTKNNK
VKVILGEDREATGILLSIDGDDGIVRMELDDQLKILNLRFLGRLDH
Download sequence
Identical sequences A0A146YUM7

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